RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 KIAA0100Q14667 2235 aaKnown RBP16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 NOTCH4Q99466 2003 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 H0Y858 1186 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 TRIM24O15164 1050 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 RPSAP08865 295 aaKnown RBP16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 SYN1P17600 705 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 HMOX2P30519 316 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 AP1S2P56377 157 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 KCNK10P57789 538 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 ERVPABLB-1P60509 514 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 PAOXQ6QHF9 649 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 BLOC1S3Q6QNY0 202 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 MILR1Q7Z6M3 343 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 GOLM1Q8NBJ4 401 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 CDCA3Q99618 268 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 SLC12A9Q9BXP2 914 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 IPPKQ9H8X2 491 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 FBRSL1Q9HCM7 1045 aaKnown RBP16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 SUN2Q9UH99 717 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 BTRCQ9Y297 605 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 SLC28A1O00337 649 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 TIMP2P16035 220 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 EMX2Q04743 252 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 RCAN2Q14206 197 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 GRB7Q14451 532 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 DNAJC5GQ8N7S2 189 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 BPIFB1Q8TDL5 484 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 PYDC1Q8WXC3 89 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 TIMM22Q9Y584 194 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 ALPK3Q96L96 1907 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 C15orf38-AP3S2A0A0A6YYH1 394 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 A0A1W2PP18 115 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 OR7A17O14581 309 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 ACOT8O14734 319 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 HIST1H2AGP0C0S8 130 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 EPB42P16452 691 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 ITGB6P18564 788 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 XRCC1P18887 633 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 HIST1H2ADP20671 130 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 AKT1P31749 480 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 CA5AP35218 305 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 CCR3P51677 355 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 B4GALNT1Q00973 533 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 TRAF3Q13114 568 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 KCNC3Q14003 757 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 PDGFRLQ15198 375 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 ARSIQ5FYB1 569 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 HENMT1Q5T8I9 393 aaKnown RBP16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 IRGCQ6NXR0 463 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 LETMD1Q6P1Q0 360 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 ARPINQ7Z6K5 226 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 CDYL2Q8N8U2 506 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 DUS3LQ96G46 650 aaKnown RBP16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 HIST1H2AHQ96KK5 128 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 HIST1H2AJQ99878 128 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 H2AFJQ9BTM1 129 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 TRIM15Q9C019 465 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 NSUN3Q9H649 340 aaKnown RBP16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 PARVBQ9HBI1 364 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 PCDH12Q9NPG4 1184 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 ABCD2Q9UBJ2 740 aa16.97■□□□□ 0.31
TRAPPC11-204ENST00000505676 FAM234BA2RU67 622 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 A8MX80 341 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 TTC34A8MYJ7 566 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 NR5A2O00482 541 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 TAPBPO15533 448 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 RGS14O43566 566 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 STK16O75716 305 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 SLC22A3O75751 556 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 CSPG5O95196 566 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 CAPN1P07384 714 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 EN2P19622 333 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 CYP2A7P20853 494 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 DPP6P42658 865 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 ZNF33BQ06732 778 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 BNIP2Q12982 314 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 DUSP6Q16828 381 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 GGTA1PQ4G0N0 100 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 ETFBKMTQ8IXQ9 262 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 TMIEQ8NEW7 156 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 OR4F6Q8NGB9 312 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 ING5Q8WYH8 240 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 GPATCH1Q9BRR8 931 aaKnown RBP16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 APOL5Q9BWW9 433 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 TRPV4Q9HBA0 871 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 THG1LQ9NWX6 298 aaKnown RBP16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 ELOVL2Q9NXB9 296 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 GDE1Q9NZC3 331 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 CD300AQ9UGN4 299 aa16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 LEF1Q9UJU2 399 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC11-204ENST00000505676 CD1EP15812 388 aa16.96■□□□□ 0.3
TRAPPC11-204ENST00000505676 PRDX3P30048 256 aaKnown RBP16.96■□□□□ 0.3
TRAPPC11-204ENST00000505676 CCR7P32248 378 aa16.96■□□□□ 0.3
TRAPPC11-204ENST00000505676 HSPA7P48741 367 aa16.96■□□□□ 0.3
TRAPPC11-204ENST00000505676 ELP6Q0PNE2 266 aa16.96■□□□□ 0.3
TRAPPC11-204ENST00000505676 C6orf136Q5SQH8 315 aa16.96■□□□□ 0.3
TRAPPC11-204ENST00000505676 CYP2U1Q7Z449 544 aa16.96■□□□□ 0.3
TRAPPC11-204ENST00000505676 FAM9CQ8IZT9 166 aa16.96■□□□□ 0.3
TRAPPC11-204ENST00000505676 PQLC1Q8N2U9 271 aa16.96■□□□□ 0.3
TRAPPC11-204ENST00000505676 PLCD3Q8N3E9 789 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms