RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 HTR1EP28566 365 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 POLR2GP62487 172 aaKnown RBP eCLIP13.11□□□□□ -0.31
LETM1-203ENST00000505551 PTPN11Q06124 597 aaPredicted RBP13.11□□□□□ -0.31
LETM1-203ENST00000505551 CDK5R2Q13319 367 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 MXD4Q14582 209 aaPredicted RBP13.11□□□□□ -0.31
LETM1-203ENST00000505551 STARD3Q14849 445 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 ESCO2Q56NI9 601 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 ZNF470Q6ECI4 717 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 OR6B2Q6IFH4 312 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 SYCE2Q6PIF2 218 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 PROSER1Q86XN7 944 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 ZDHHC13Q8IUH4 622 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 DCP1BQ8IZD4 617 aaKnown RBP13.11□□□□□ -0.31
LETM1-203ENST00000505551 CSPG4P5Q96PW8 444 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 NSMCE4AQ9NXX6 385 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 BFARQ9NZS9 450 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 POLHQ9Y253 713 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 RWDD3Q9Y3V2 267 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 ATP6AP2A0A1C7CYW4 349 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 ATP6AP2O75787 350 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 SUPT7LO94864 414 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 OR5F1O95221 314 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 CELF2O95319 508 aaKnown RBP13.11□□□□□ -0.31
LETM1-203ENST00000505551 MATN4O95460 622 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 RBP1P09455 135 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 JUNDP17535 347 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 EFNA5P52803 228 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 SLC35A2P78381 396 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 POU6F2P78424 691 aaPredicted RBP13.11□□□□□ -0.31
LETM1-203ENST00000505551 ANKRD39Q53RE8 183 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 PLPPR4Q7Z2D5 763 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 SPATA2LQ8IUW3 424 aaPredicted RBP13.11□□□□□ -0.31
LETM1-203ENST00000505551 MIER2Q8N344 545 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 INTS12Q96CB8 462 aaKnown RBP13.11□□□□□ -0.31
LETM1-203ENST00000505551 P2RY11Q96G91 374 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 C3orf30Q96M34 536 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 PTPN18Q99952 460 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 C6orf62Q9GZU0 229 aaPredicted RBP13.11□□□□□ -0.31
LETM1-203ENST00000505551 WASH6PQ9NQA3 447 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 ERAP1Q9NZ08 941 aa13.11□□□□□ -0.31
LETM1-203ENST00000505551 LOC100130705A0A1B0GUX0 176 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 G3V2T6 193 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 OGTO15294 1046 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 ZNF780AO75290 641 aaPredicted RBP13.1□□□□□ -0.31
LETM1-203ENST00000505551 PRKD3O94806 890 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 ARHGEF15O94989 841 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 IL7P13232 177 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 ETV6P41212 452 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 FCGRTP55899 365 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 RAB10P61026 200 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 MVKQ03426 396 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 IL18R1Q13478 541 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 DGCR6Q14129 220 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 ZNF460Q14592 562 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 ZNF517Q6ZMY9 492 aaPredicted RBP13.1□□□□□ -0.31
LETM1-203ENST00000505551 KCTD20Q7Z5Y7 419 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 HID1Q8IV36 788 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 C19orf60Q96EN9 201 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 RBM18Q96H35 190 aaKnown RBP13.1□□□□□ -0.31
LETM1-203ENST00000505551 TWNKQ96RR1 684 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 PHOX2BQ99453 314 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 RRAGCQ9HB90 399 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 CPA4Q9UI42 421 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 SNX6Q9UNH7 406 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 NRCAMQ92823 1304 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 KRT87PA6NCN2 255 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 ASB14A6NK59 587 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 PRMT5O14744 637 aaPredicted RBP13.1□□□□□ -0.31
LETM1-203ENST00000505551 HBP1O60381 514 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 HUS1O60921 280 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 SNAI1O95863 264 aaPredicted RBP13.1□□□□□ -0.31
LETM1-203ENST00000505551 RAP2AP10114 183 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 C21orf62-AS1Q17RA5 79 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 DUOXA2Q1HG44 320 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 LRRC26Q2I0M4 334 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 C5orf22Q49AR2 442 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 FAM219BQ5XKK7 198 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 SDE2Q6IQ49 451 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 FAM122CQ6P4D5 195 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 CEP97Q8IW35 865 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 ZNF567Q8N184 647 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 SPATA6LQ8N4H0 392 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 GTF2H4Q92759 462 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 SNAPC3Q92966 411 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 CYP2S1Q96SQ9 504 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 BCO2Q9BYV7 579 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 NUAK2Q9H093 628 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 CXCL16Q9H2A7 254 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 AKTIPQ9H8T0 292 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 EHD3Q9NZN3 535 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 MKLN1Q9UL63 735 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 RNF112Q9ULX5 631 aa13.1□□□□□ -0.31
LETM1-203ENST00000505551 TMEM238LA0A1B0GVL6 79 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 C9JVG2 144 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 MED26O95402 600 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 ANGPTL1O95841 491 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 NFICP08651 508 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 DBTP11182 482 aaKnown RBP13.09□□□□□ -0.31
LETM1-203ENST00000505551 CD36P16671 472 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 ITGA2P17301 1181 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms