RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 QRFPRQ96P65 431 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 SLC25A33Q9BSK2 321 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 KATNB1Q9BVA0 655 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 FNDC11Q9BVV2 318 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 FOXP1Q9H334 677 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 DPAGT1Q9H3H5 408 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 HHATLQ9HCP6 504 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 RHCGQ9UBD6 479 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 CDH7Q9ULB5 785 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 NME7Q9Y5B8 376 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 PTPRCP08575 1304 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 IGSF1Q8N6C5 1336 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 A0A1B0GVT2 93 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 A0A1W2PPQ1 181 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 OR6C75A6NL08 312 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 CLDN4O14493 209 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 SERPINI2O75830 405 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 GAGE7O76087 117 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 SLPIP03973 132 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 FAM58BPP0C7Q3 252 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 OR2T7P0C7T2 308 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 GAGE12FP0CL80 117 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 GAGE12GP0CL81 117 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 GAGE12IP0CL82 117 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 CYP11B2P19099 503 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 ALDH3A2P51648 485 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 SSBP2P81877 361 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 PDE1BQ01064 536 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 UBXN1Q04323 297 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 GAGE1Q13065 139 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 GAGE4Q13068 117 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 MORF4L2Q15014 288 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 SMU1Q2TAY7 513 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 ANKRD20A4Q4UJ75 823 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 ANKRD20A8PQ5CZ79 823 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 EFHC1Q5JVL4 640 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 ANKRD20A2Q5SQ80 823 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 LCE4AQ5TA78 99 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 ANKRD20A1Q5TYW2 823 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 ANKRD20A3Q5VUR7 823 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 SHEQ5VZ18 495 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 MEPCEQ7L2J0 689 aaKnown RBP5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 HOOK3Q86VS8 718 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 ZSCAN30Q86W11 494 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 CREBRFQ8IUR6 639 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 TUSC5Q8IXB3 177 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 ZNF34Q8IZ26 560 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 C1orf52Q8N6N3 182 aaKnown RBP5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 C10orf53Q8N6V4 93 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 NAT8LQ8N9F0 302 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 ATAD1Q8NBU5 361 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 SLC16A11Q8NCK7 471 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 CTCFLQ8NI51 663 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 C9orf43Q8TAL5 461 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 HES6Q96HZ4 224 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 SFXN2Q96NB2 322 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 MUS81Q96NY9 551 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 PCYT2Q99447 389 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 FEVQ99581 238 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 SEMA6AQ9H2E6 1030 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 ADPRHL2Q9NX46 363 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 CWC25Q9NXE8 425 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 ARMCX3Q9UH62 379 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 GRIP1Q9Y3R0 1128 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 KNSTRNQ9Y448 316 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 SNX9Q9Y5X1 595 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 PTGDR2Q9Y5Y4 395 aa5.14□□□□□ -1.59
HMGB1P3-201ENST00000502802 SNAPC4Q5SXM2 1469 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 A0A0U1RQJ8 604 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 TMEM221A6NGB7 291 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 INAFM1C9JVW0 142 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 MEIS2O14770 477 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 TNFRSF13BO14836 293 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 VIMP08670 466 aaKnown RBP5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 TMEM191BP0C7N4 346 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 HOXB2P14652 356 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 ATP6V1E1P36543 226 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 SLC9A3P48764 834 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 ASCL1P50553 236 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 POLR2LP62875 67 aaKnown RBP5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 ABATP80404 500 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 PRKCZQ05513 592 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 TROAPQ12815 778 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 RRS1Q15050 365 aaKnown RBP5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 OASLQ15646 514 aaKnown RBP5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 TWISTNBQ3B726 338 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 KRTAP15-1Q3LI76 137 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 CCDC92Q53HC0 331 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 RAB6CQ53S08 254 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 GLRA4Q5JXX5 417 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 GCNT6Q5T4J0 391 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 DPY19L2P1Q6NXN4 242 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 GBP6Q6ZN66 633 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 DBX2Q6ZNG2 339 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 DSG4Q86SJ6 1040 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 TLK2Q86UE8 772 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 MAP7D3Q8IWC1 876 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 KLHL7Q8IXQ5 586 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 NHLRC2Q8NBF2 726 aa5.13□□□□□ -1.59
HMGB1P3-201ENST00000502802 SPC24Q8NBT2 197 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms