RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 FFAR4Q5NUL3 377 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 GCNT6Q5T4J0 391 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 ARHGEF16Q5VV41 709 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 GAGE2AQ6NT46 116 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 FAM180BQ6P0A1 224 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 MFSD6Q6ZSS7 791 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 GALNT5Q7Z7M9 940 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 KRTAP7-1Q8IUC3 87 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 APLFQ8IW19 511 aaPredicted RBP2.28□□□□□ -2.04
SMAD1-203ENST00000502342 L3MBTL4Q8NA19 623 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 ANKRD52Q8NB46 1076 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 ZNF485Q8NCK3 441 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 DDHD1Q8NEL9 900 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 TBC1D16Q8TBP0 767 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 WDR20Q8TBZ3 569 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 ZFAND2BQ8WV99 257 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 DAZLQ92904 295 aaKnown RBP2.28□□□□□ -2.04
SMAD1-203ENST00000502342 SAT2Q96F10 170 aaPredicted RBP2.28□□□□□ -2.04
SMAD1-203ENST00000502342 NSL1Q96IY1 281 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 RAB6CQ9H0N0 254 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 COQ3Q9NZJ6 369 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 GAGE2DQ9UEU5 116 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 RABGAP1Q9Y3P9 1069 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.28□□□□□ -2.04
SMAD1-203ENST00000502342 SNED1Q8TER0 1413 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 ELOVL7A1L3X0 281 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 A8MZ25 164 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 F5H0A9 414 aaPredicted RBP2.27□□□□□ -2.05
SMAD1-203ENST00000502342 NR5A2O00482 541 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 CSPG5O95196 566 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 OR2C1O95371 312 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 HMBSP08397 361 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 ACP2P11117 423 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 LIFP15018 202 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 GNB3P16520 340 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 CEACAM8P31997 349 aaPredicted RBP2.27□□□□□ -2.05
SMAD1-203ENST00000502342 NKX2-1P43699 371 aaPredicted RBP2.27□□□□□ -2.05
SMAD1-203ENST00000502342 THOP1P52888 689 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 MRPS5P82675 430 aaKnown RBP2.27□□□□□ -2.05
SMAD1-203ENST00000502342 ITGA9Q13797 1035 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 RRS1Q15050 365 aaKnown RBP2.27□□□□□ -2.05
SMAD1-203ENST00000502342 GTDC1Q4AE62 458 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 CORO6Q6QEF8 472 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 NOTCH2NLQ7Z3S9 236 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 ISCA2Q86U28 154 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 PLD3Q8IV08 490 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 MCEMP1Q8IX19 187 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 ADGRF2Q8IZF7 708 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 ZNF843Q8N446 348 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 TEX19Q8NA77 164 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 OR2T12Q8NG77 320 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 TMEM190Q8WZ59 177 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 MTERF3Q96E29 417 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 TIGD1Q96MW7 591 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 ZNF582Q96NG8 517 aaPredicted RBP2.27□□□□□ -2.05
SMAD1-203ENST00000502342 DACH2Q96NX9 599 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 HRH4Q9H3N8 390 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 SLA2Q9H6Q3 261 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 HHATLQ9HCP6 504 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 TAS2R14Q9NYV8 317 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 NPAP1Q9NZP6 1156 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 AMACRQ9UHK6 382 aa2.27□□□□□ -2.05
SMAD1-203ENST00000502342 ZNF215Q9UL58 517 aaPredicted RBP2.27□□□□□ -2.05
SMAD1-203ENST00000502342 EXO1Q9UQ84 846 aaKnown RBP2.27□□□□□ -2.05
SMAD1-203ENST00000502342 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.27□□□□□ -2.05
SMAD1-203ENST00000502342 SPIN1Q9Y657 262 aaPredicted RBP2.27□□□□□ -2.05
SMAD1-203ENST00000502342 B4DLN1 442 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 VILLO15195 856 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 SLC22A2O15244 555 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 ZBED4O75132 1171 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 PTP4A3O75365 173 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 TRMUO75648 421 aaKnown RBP2.26□□□□□ -2.05
SMAD1-203ENST00000502342 EML2O95834 649 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 EDN1P05305 212 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 CEACAM1P13688 526 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 ZNF26P17031 533 aaPredicted RBP2.26□□□□□ -2.05
SMAD1-203ENST00000502342 PAX3P23760 479 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 ITGA3P26006 1051 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 HADHAP40939 763 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 SUOXP51687 545 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 MRPL12P52815 198 aaKnown RBP2.26□□□□□ -2.05
SMAD1-203ENST00000502342 MFAP4P55083 255 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 TMF1P82094 1093 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 SP3Q02447 781 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 MELKQ14680 651 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 ZFP69Q49AA0 526 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 FAM98BQ52LJ0 330 aaKnown RBP2.26□□□□□ -2.05
SMAD1-203ENST00000502342 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 CYP4A22Q5TCH4 519 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 FAM109BQ6ICB4 259 aaPredicted RBP2.26□□□□□ -2.05
SMAD1-203ENST00000502342 ZNF497Q6ZNH5 498 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 C4orf50Q6ZRC1 276 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 INTS8Q75QN2 995 aaKnown RBP2.26□□□□□ -2.05
SMAD1-203ENST00000502342 TBC1D1Q86TI0 1168 aaPredicted RBP2.26□□□□□ -2.05
SMAD1-203ENST00000502342 ZNF554Q86TJ5 538 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 KBTBD8Q8NFY9 601 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 OR2T6Q8NHC8 308 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 ART5Q96L15 291 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 MYADMQ96S97 322 aa2.26□□□□□ -2.05
SMAD1-203ENST00000502342 RTP3Q9BQQ7 232 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms