RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 PTMAP06454 111 aaKnown RBP12.65□□□□□ -0.38
FN1-226ENST00000496542 EBLN1P0CF75 366 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 ITGALP20701 1170 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 CSRP3P50461 194 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 ZNF140P52738 457 aaPredicted RBP12.65□□□□□ -0.38
FN1-226ENST00000496542 BCL7AQ4VC05 210 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 CYB5D1Q6P9G0 228 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 RAD9BQ6WBX8 426 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 CERS6Q6ZMG9 384 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 SPDYE1Q8NFV5 336 aaPredicted RBP12.65□□□□□ -0.38
FN1-226ENST00000496542 OR2L2Q8NH16 312 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 APOBEC4Q8WW27 367 aaKnown RBP12.65□□□□□ -0.38
FN1-226ENST00000496542 SLC41A2Q96JW4 573 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 CALR3Q96L12 384 aaKnown RBP12.65□□□□□ -0.38
FN1-226ENST00000496542 RMDN2Q96LZ7 410 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 MAP3K3Q99759 626 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 LACRTQ9GZZ8 138 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 FAM96AQ9H5X1 160 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 PDE7BQ9NP56 450 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 ZNF71Q9NQZ8 489 aaPredicted RBP12.65□□□□□ -0.38
FN1-226ENST00000496542 RARRES3Q9UL19 164 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 ACSL5Q9ULC5 683 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 UBA6A0AVT1 1052 aaPredicted RBP12.64□□□□□ -0.39
FN1-226ENST00000496542 TLCD2A6NGC4 264 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 BTNL10A8MVZ5 291 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 POLBP06746 335 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 CCNYL3P0C7X3 344 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 PYGMP11217 842 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 RALBP11234 206 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 FOLR1P15328 257 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 ARCN1P48444 511 aaKnown RBP12.64□□□□□ -0.39
FN1-226ENST00000496542 XIAPP98170 497 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 PDE1BQ01064 536 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 TLE1Q04724 770 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 KRT33BQ14525 404 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 GSE1Q14687 1217 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 SKIDA1Q1XH10 827 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 PWWP2BQ6NUJ5 590 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 ARMC6Q6NXE6 501 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 ARHGEF18Q6ZSZ5 1173 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 KIAA1328Q86T90 577 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 OOSP2Q86WS3 158 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 CFAP206Q8IYR0 622 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 NXPE1Q8N323 547 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 LILRA3Q8N6C8 439 aaPredicted RBP12.64□□□□□ -0.39
FN1-226ENST00000496542 LRRC57Q8N9N7 239 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 ULK4Q96C45 1275 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 LRRC45Q96CN5 670 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 MRFAP1L1Q96HT8 127 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 PPP1R2P1Q96PQ5 205 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 KIR3DX1Q9H7L2 352 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 HRASLS2Q9NWW9 162 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 SEMA5BQ9P283 1151 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 SLC24A2Q9UI40 661 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 PCDHB3Q9Y5E6 796 aa12.64□□□□□ -0.39
FN1-226ENST00000496542 CDC14CA4D256 554 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 KLHL33A6NCF5 533 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 OR6C74A6NCV1 312 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 CFAP99D6REC4 459 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 SGTAO43765 313 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 MT-ND3P03897 115 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 HADHAP40939 763 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 PRLHRP49683 370 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 VAV2P52735 878 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 ACY1Q03154 408 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 MSLNQ13421 630 aaPredicted RBP12.63□□□□□ -0.39
FN1-226ENST00000496542 DNASE1L3Q13609 305 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 SEPT6Q14141 434 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 ERV3-1Q14264 604 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 CRTC2Q53ET0 693 aaPredicted RBP12.63□□□□□ -0.39
FN1-226ENST00000496542 DENND5AQ6IQ26 1287 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 MICALCLQ6ZW33 695 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 PEX26Q7Z412 305 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 SNX20Q7Z614 316 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 KMT5CQ86Y97 462 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 FAM71DQ8N9W8 422 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 HM13Q8TCT9 377 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 CT55Q8WUE5 264 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 DNAJC1Q96KC8 554 aaKnown RBP12.63□□□□□ -0.39
FN1-226ENST00000496542 CD180Q99467 661 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 COPS8Q99627 209 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 RBSNQ9H1K0 784 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 FGF21Q9NSA1 209 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 KCND3Q9UK17 655 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 AMFRQ9UKV5 643 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 PADI1Q9ULC6 663 aa12.63□□□□□ -0.39
FN1-226ENST00000496542 PACSIN2Q9UNF0 486 aaPredicted RBP12.63□□□□□ -0.39
FN1-226ENST00000496542 PIPSLA2A3N6 862 aa12.62□□□□□ -0.39
FN1-226ENST00000496542 GOLGA6L9A6NEM1 432 aa12.62□□□□□ -0.39
FN1-226ENST00000496542 GOLGA6L3A6NEY3 463 aa12.62□□□□□ -0.39
FN1-226ENST00000496542 LDB2O43679 373 aa12.62□□□□□ -0.39
FN1-226ENST00000496542 ZNF189O75820 626 aaPredicted RBP12.62□□□□□ -0.39
FN1-226ENST00000496542 NTRK1P04629 796 aa12.62□□□□□ -0.39
FN1-226ENST00000496542 FURINP09958 794 aa12.62□□□□□ -0.39
FN1-226ENST00000496542 ATP1B2P14415 290 aaPredicted RBP12.62□□□□□ -0.39
FN1-226ENST00000496542 TPH1P17752 444 aa12.62□□□□□ -0.39
FN1-226ENST00000496542 POLR2CP19387 275 aaPredicted RBP12.62□□□□□ -0.39
FN1-226ENST00000496542 MC4RP32245 332 aa12.62□□□□□ -0.39
FN1-226ENST00000496542 KPNA2P52292 529 aaKnown RBP12.62□□□□□ -0.39
FN1-226ENST00000496542 HSD11B2P80365 405 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms