RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 E7EVH7 732 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 STK17BO94768 372 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 AP2A2O94973 939 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 TPH1P17752 444 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 MAP4P27816 1152 aaKnown RBP15.36■□□□□ 0.05
HDAC4-213ENST00000496347 NDUFS1P28331 727 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 SEMA5AQ13591 1074 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 SKIDA1Q1XH10 827 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 ZRANB3Q5FWF4 1079 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 DRICH1Q6PGQ1 229 aaPredicted RBP15.36■□□□□ 0.05
HDAC4-213ENST00000496347 PACS1Q6VY07 963 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 SERPINA9Q86WD7 417 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 OOSP2Q86WS3 158 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 KMT5CQ86Y97 462 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 LRRC8AQ8IWT6 810 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 CARFQ8N187 725 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 DNAAF3Q8N9W5 541 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 KLHL6Q8WZ60 621 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 UBXN4Q92575 508 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.36■□□□□ 0.05
HDAC4-213ENST00000496347 KIAA1143Q96AT1 154 aaPredicted RBP15.36■□□□□ 0.05
HDAC4-213ENST00000496347 CTRCQ99895 268 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 COG4Q9H9E3 785 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 SEMA5BQ9P283 1151 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 PAK5Q9P286 719 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 SLC24A2Q9UI40 661 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 COLEC10Q9Y6Z7 277 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 OR5K3A6NET4 321 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 QSOX1O00391 747 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 DLGAP3O95886 979 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 PRB1P04280 392 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 LIFP15018 202 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 NELFEP18615 380 aaKnown RBP15.35■□□□□ 0.05
HDAC4-213ENST00000496347 LMAN1P49257 510 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 FOXM1Q08050 763 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 RPA4Q13156 261 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 ITIH4Q14624 930 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 ZNF658BQ4V348 819 aaPredicted RBP15.35■□□□□ 0.05
HDAC4-213ENST00000496347 CACHD1Q5VU97 1274 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 CAPRIN2Q6IMN6 1127 aaKnown RBP15.35■□□□□ 0.05
HDAC4-213ENST00000496347 DUS1LQ6P1R4 473 aaKnown RBP15.35■□□□□ 0.05
HDAC4-213ENST00000496347 AFTPHQ6ULP2 937 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 PPP1R21Q6ZMI0 780 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 FAM92BQ6ZTR7 304 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 ZNF843Q8N446 348 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 ESX1Q8N693 406 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 OR52K1Q8NGK4 314 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 MAIP1Q8WWC4 291 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 C1orf54Q8WWF1 131 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 JPH3Q8WXH2 748 aaPredicted RBP15.35■□□□□ 0.05
HDAC4-213ENST00000496347 PEX13Q92968 403 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 MED8Q96G25 268 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 CDKN2AIPNLQ96HQ2 116 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 SLC41A2Q96JW4 573 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 RANBP9Q96S59 729 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 INSM2Q96T92 566 aaPredicted RBP15.35■□□□□ 0.05
HDAC4-213ENST00000496347 EFHD1Q9BUP0 239 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 ULBP3Q9BZM4 244 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 SPRY4Q9C004 299 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 FAM96AQ9H5X1 160 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 ETNK1Q9HBU6 452 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 APMAPQ9HDC9 416 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 EIF2B3Q9NR50 452 aaKnown RBP15.35■□□□□ 0.05
HDAC4-213ENST00000496347 RAB6BQ9NRW1 208 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 PIH1D1Q9NWS0 290 aaKnown RBP15.35■□□□□ 0.05
HDAC4-213ENST00000496347 FAM8A1Q9UBU6 413 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 RIMKLBQ9ULI2 386 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 CFAP20Q9Y6A4 193 aaKnown RBP15.35■□□□□ 0.05
HDAC4-213ENST00000496347 BSNQ9UPA5 3926 aa15.35■□□□□ 0.05
HDAC4-213ENST00000496347 MATN2O00339 956 aa15.34■□□□□ 0.05
HDAC4-213ENST00000496347 APRTP07741 180 aa15.34■□□□□ 0.05
HDAC4-213ENST00000496347 WT1P19544 449 aaPredicted RBP15.34■□□□□ 0.05
HDAC4-213ENST00000496347 MSNP26038 577 aaKnown RBP15.34■□□□□ 0.05
HDAC4-213ENST00000496347 NSG1P42857 185 aa15.34■□□□□ 0.05
HDAC4-213ENST00000496347 SEPHS1P49903 392 aa15.34■□□□□ 0.05
HDAC4-213ENST00000496347 PPP1CAP62136 330 aa15.34■□□□□ 0.05
HDAC4-213ENST00000496347 CCZ1BP86790 482 aa15.34■□□□□ 0.05
HDAC4-213ENST00000496347 CCZ1P86791 482 aaPredicted RBP15.34■□□□□ 0.05
HDAC4-213ENST00000496347 ABHD18Q0P651 414 aa15.34■□□□□ 0.05
HDAC4-213ENST00000496347 SIX1Q15475 284 aaPredicted RBP15.34■□□□□ 0.05
HDAC4-213ENST00000496347 CCNG2Q16589 344 aa15.34■□□□□ 0.05
HDAC4-213ENST00000496347 DBN1Q16643 649 aa15.34■□□□□ 0.05
HDAC4-213ENST00000496347 DNTTIP2Q5QJE6 756 aaKnown RBP15.34■□□□□ 0.05
HDAC4-213ENST00000496347 C4orf22Q6V702 233 aa15.34■□□□□ 0.05
HDAC4-213ENST00000496347 NLRP9Q7RTR0 991 aa15.34■□□□□ 0.05
HDAC4-213ENST00000496347 TAS2R42Q7RTR8 314 aa15.34■□□□□ 0.05
HDAC4-213ENST00000496347 PIANPQ8IYJ0 282 aa15.34■□□□□ 0.05
HDAC4-213ENST00000496347 CFAP206Q8IYR0 622 aa15.34■□□□□ 0.05
HDAC4-213ENST00000496347 TAB3Q8N5C8 712 aaPredicted RBP15.34■□□□□ 0.05
HDAC4-213ENST00000496347 ACVR1CQ8NER5 493 aa15.34■□□□□ 0.05
HDAC4-213ENST00000496347 SPDYE1Q8NFV5 336 aaPredicted RBP15.34■□□□□ 0.05
HDAC4-213ENST00000496347 OR13J1Q8NGT2 312 aa15.34■□□□□ 0.05
HDAC4-213ENST00000496347 NAT14Q8WUY8 206 aa15.34■□□□□ 0.05
HDAC4-213ENST00000496347 GPN2Q9H9Y4 310 aaPredicted RBP15.34■□□□□ 0.05
HDAC4-213ENST00000496347 GOLGA6L3A6NEY3 463 aa15.33■□□□□ 0.04
HDAC4-213ENST00000496347 ZNF891A8MT65 544 aaPredicted RBP15.33■□□□□ 0.04
HDAC4-213ENST00000496347 F8W8V4 182 aa15.33■□□□□ 0.04
HDAC4-213ENST00000496347 IFRD1O00458 451 aaPredicted RBP15.33■□□□□ 0.04
HDAC4-213ENST00000496347 KIF1CO43896 1103 aaKnown RBP15.33■□□□□ 0.04
HDAC4-213ENST00000496347 FTH1P02794 183 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms