RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 KLK10O43240 276 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 PAPSS1O43252 624 aaPredicted RBP4.33□□□□□ -1.72
VPS52-222ENST00000495981 STX6O43752 255 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 CCNT2O60583 730 aaKnown RBP4.33□□□□□ -1.72
VPS52-222ENST00000495981 EXOC3O60645 756 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 SUN1O94901 812 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 F9P00740 461 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 IGLV3-27P01718 113 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 HLA-DRAP01903 254 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 NR3C1P04150 777 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 CYP1A1P04798 512 aaPredicted RBP4.33□□□□□ -1.72
VPS52-222ENST00000495981 FAM200BP0CF97 657 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 TRIM49P0CI25 452 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 TRIM49CP0CI26 452 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 TNFRSF8P28908 595 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 ADORA2BP29275 332 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 HLA-FP30511 346 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 CORO1AP31146 461 aaKnown RBP4.33□□□□□ -1.72
VPS52-222ENST00000495981 STAT1P42224 750 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 CSNK1EP49674 416 aaKnown RBP4.33□□□□□ -1.72
VPS52-222ENST00000495981 TPMTP51580 245 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 CCR9P51686 369 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 SGSHP51688 502 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 TMPRSS3P57727 454 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 LOXL3P58215 753 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 FAM3BP58499 235 aaPredicted RBP4.33□□□□□ -1.72
VPS52-222ENST00000495981 TIAL1Q01085 375 aaKnown RBP eCLIP4.33□□□□□ -1.72
VPS52-222ENST00000495981 STK4Q13043 487 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 PDCLQ13371 301 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 PKP1Q13835 747 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 ZNF234Q14588 700 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 STK38Q15208 465 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 SHBQ15464 509 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 KNOP1Q1ED39 458 aaKnown RBP4.33□□□□□ -1.72
VPS52-222ENST00000495981 KRTAP21-3Q3LHN1 58 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 RAB41Q5JT25 222 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 RESP18Q5W5W9 173 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 DGAT2L7PQ6IED9 249 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 INO80CQ6PI98 192 aaPredicted RBP4.33□□□□□ -1.72
VPS52-222ENST00000495981 TPGS1Q6ZTW0 290 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 B4GALNT4Q76KP1 1039 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 R3HCC1LQ7Z5L2 792 aaKnown RBP4.33□□□□□ -1.72
VPS52-222ENST00000495981 TRABD2AQ86V40 505 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 UNC93AQ86WB7 457 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 SRRM1Q8IYB3 904 aaKnown RBP4.33□□□□□ -1.72
VPS52-222ENST00000495981 CRYBG2Q8N1P7 616 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 CPXM2Q8N436 756 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 ZNF276Q8N554 614 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.33□□□□□ -1.72
VPS52-222ENST00000495981 NKAIN3Q8N8D7 197 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 CADM4Q8NFZ8 388 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 WFDC5Q8TCV5 224 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 TAS1R2Q8TE23 839 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 SORCS1Q8WY21 1168 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 JAKMIP2Q96AA8 810 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 LGMNQ99538 433 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 DPYSL5Q9BPU6 564 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 MED10Q9BTT4 135 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 PANK2Q9BZ23 570 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 BRD8Q9H0E9 1235 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 PCED1AQ9H1Q7 454 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 TMEM245Q9H330 911 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 FBXO44Q9H4M3 255 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 FAM124BQ9H5Z6 455 aaPredicted RBP4.33□□□□□ -1.72
VPS52-222ENST00000495981 RMI1Q9H9A7 625 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 NOD2Q9HC29 1040 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 TLR8Q9NR97 1041 aaKnown RBP4.33□□□□□ -1.72
VPS52-222ENST00000495981 WSB2Q9NYS7 404 aaPredicted RBP4.33□□□□□ -1.72
VPS52-222ENST00000495981 PLK2Q9NYY3 685 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 NTMQ9P121 344 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 CGNQ9P2M7 1197 aaKnown RBP4.33□□□□□ -1.72
VPS52-222ENST00000495981 CHORDC1Q9UHD1 332 aaPredicted RBP4.33□□□□□ -1.72
VPS52-222ENST00000495981 STOML2Q9UJZ1 356 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 LSM7Q9UK45 103 aaKnown RBP4.33□□□□□ -1.72
VPS52-222ENST00000495981 NAALADL1Q9UQQ1 740 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 ZDHHC9Q9Y397 364 aa4.33□□□□□ -1.72
VPS52-222ENST00000495981 HEMK1Q9Y5R4 338 aaPredicted RBP4.33□□□□□ -1.72
VPS52-222ENST00000495981 LOC105369274A0A096LPK9 316 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 LOC102723532A0A0G2JNH3 316 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 PVALEFA0A1B0GWK0 134 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 A0A1W2PRQ8 180 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 C9orf118A6NHY6 69 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 TULP2O00295 520 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 FFAR3O14843 346 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 MAPK13O15264 365 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 BCAT2O15382 392 aaPredicted RBP4.32□□□□□ -1.72
VPS52-222ENST00000495981 POLR2DO15514 142 aaKnown RBP4.32□□□□□ -1.72
VPS52-222ENST00000495981 ZSCAN9O15535 394 aaPredicted RBP4.32□□□□□ -1.72
VPS52-222ENST00000495981 FLRT2O43155 660 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 MSI1O43347 362 aaKnown RBP4.32□□□□□ -1.72
VPS52-222ENST00000495981 HEXIM1O94992 359 aaKnown RBP4.32□□□□□ -1.72
VPS52-222ENST00000495981 IGHV4-34P06331 123 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 RARGP13631 454 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 HK1P19367 917 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 UQCRC1P31930 480 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 ATP5C1P36542 298 aaKnown RBP4.32□□□□□ -1.72
VPS52-222ENST00000495981 MATKP42679 507 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 ACADVLP49748 655 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 ZNF132P52740 706 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 AP3M2P53677 418 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms