RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 NKAPQ8N5F7 415 aaKnown RBP13.25□□□□□ -0.29
GPC1-209ENST00000495100 FRS2Q8WU20 508 aa13.25□□□□□ -0.29
GPC1-209ENST00000495100 TMEM248Q9NWD8 314 aa13.25□□□□□ -0.29
GPC1-209ENST00000495100 CFAP97Q9P2B7 532 aa13.25□□□□□ -0.29
GPC1-209ENST00000495100 SNX8Q9Y5X2 465 aa13.25□□□□□ -0.29
GPC1-209ENST00000495100 A0A1W2PRU2 124 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 KPNA5O15131 536 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 ACRP10323 421 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 TNFRSF1BP20333 461 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 DOK6Q6PKX4 331 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 ABRAXAS1Q6UWZ7 409 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 PIWIL3Q7Z3Z3 882 aaKnown RBP13.24□□□□□ -0.29
GPC1-209ENST00000495100 MARVELD2Q8N4S9 558 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 RANBP9Q96S59 729 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 ITM2CQ9NQX7 267 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 SUCOQ9UBS9 1254 aaKnown RBP13.24□□□□□ -0.29
GPC1-209ENST00000495100 PRKAB1Q9Y478 270 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 M0R3G1 203 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 PTNP21246 168 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 S100A3P33764 101 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 RAD23AP54725 363 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 LSAMPQ13449 338 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 MBTPS1Q14703 1052 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 OTOP2Q7RTS6 562 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 GOLGA7Q7Z5G4 137 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 HORMAD1Q86X24 394 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 KIAA2013Q8IYS2 634 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 SFRP1Q8N474 314 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 TET1Q8NFU7 2136 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 LKAAEAR1Q8TD35 194 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 PGAP3Q96FM1 320 aaPredicted RBP13.24□□□□□ -0.29
GPC1-209ENST00000495100 CENPNQ96H22 339 aaPredicted RBP13.24□□□□□ -0.29
GPC1-209ENST00000495100 EXOSC4Q9NPD3 245 aaKnown RBP13.24□□□□□ -0.29
GPC1-209ENST00000495100 PAPPA2Q9BXP8 1791 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 ALPK2Q86TB3 2170 aa13.24□□□□□ -0.29
GPC1-209ENST00000495100 EPB42P16452 691 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 CDH2P19022 906 aaPredicted RBP13.23□□□□□ -0.29
GPC1-209ENST00000495100 MAGEA12P43365 314 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 ERMP1Q7Z2K6 904 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 CNIH3Q8TBE1 160 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 FAM81AQ8TBF8 368 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 WFDC5Q8TCV5 224 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 UBXN10Q96LJ8 280 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 FAM126AQ9BYI3 521 aaPredicted RBP13.23□□□□□ -0.29
GPC1-209ENST00000495100 VAPAQ9P0L0 249 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 IFT80Q9P2H3 777 aaPredicted RBP13.23□□□□□ -0.29
GPC1-209ENST00000495100 RAPGEFL1Q9UHV5 662 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 SLCO3A1Q9UIG8 710 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 ZNF229Q9UJW7 825 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 SLC22A14Q9Y267 594 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 PRSS21Q9Y6M0 314 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 RLFQ13129 1914 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 A0A0G2JN53 185 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 G3V2T6 193 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 KERAO60938 352 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 FADS2O95864 444 aaKnown RBP13.23□□□□□ -0.29
GPC1-209ENST00000495100 AGXTP21549 392 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 RPIAP49247 311 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 HK3P52790 923 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 MEF2AQ02078 507 aaPredicted RBP13.23□□□□□ -0.29
GPC1-209ENST00000495100 SP3Q02447 781 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 BTG3Q14201 252 aaPredicted RBP13.23□□□□□ -0.29
GPC1-209ENST00000495100 DMC1Q14565 340 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 SYTL3Q4VX76 610 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 XKR4Q5GH76 650 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 ZC3H7AQ8IWR0 971 aaKnown RBP13.23□□□□□ -0.29
GPC1-209ENST00000495100 ING5Q8WYH8 240 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 OTULINQ96BN8 352 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 NRBF2Q96F24 287 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 COMMD8Q9NX08 183 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 NEDD8-MDP1E9PL57 170 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 BCL10O95999 233 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 SERPINA1P01009 418 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 TYMPP19971 482 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 IL12AP29459 219 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 ALDH9A1P49189 494 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 OR4F3Q6IEY1 312 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 C17orf99Q6UX52 265 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 ITIH5Q86UX2 942 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 SYTL1Q8IYJ3 562 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 KIAA1191Q96A73 305 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 PANX1Q96RD7 426 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 TRMOQ9BU70 441 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 POLE4Q9NR33 117 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 CTPS2Q9NRF8 586 aa13.23□□□□□ -0.29
GPC1-209ENST00000495100 A0A1W2PP18 115 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 M0R129 80 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 KPNA3O00505 521 aaPredicted RBP13.22□□□□□ -0.29
GPC1-209ENST00000495100 ATF6P18850 670 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 NUDT6P53370 316 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 SYT16Q17RD7 645 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 PYCR3Q53H96 274 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.22□□□□□ -0.29
GPC1-209ENST00000495100 FAM43BQ6ZT52 329 aaPredicted RBP13.22□□□□□ -0.29
GPC1-209ENST00000495100 RBM23Q86U06 439 aaKnown RBP13.22□□□□□ -0.29
GPC1-209ENST00000495100 DTWD1Q8N5C7 304 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 CYB5D2Q8WUJ1 264 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 MYO19Q96H55 970 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 WRAP53Q9BUR4 548 aaKnown RBP13.22□□□□□ -0.29
GPC1-209ENST00000495100 ABCB8Q9NUT2 735 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms