RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 RSL1D1O76021 490 aaKnown RBP11.02□□□□□ -0.64
CHMP3-209ENST00000494623 SEC24DO94855 1032 aaPredicted RBP11.02□□□□□ -0.64
CHMP3-209ENST00000494623 URODP06132 367 aa11.02□□□□□ -0.64
CHMP3-209ENST00000494623 CKMP06732 381 aa11.02□□□□□ -0.64
CHMP3-209ENST00000494623 GPIP06744 558 aa11.02□□□□□ -0.64
CHMP3-209ENST00000494623 GNAO1P09471 354 aa11.02□□□□□ -0.64
CHMP3-209ENST00000494623 GABRR2P28476 465 aa11.02□□□□□ -0.64
CHMP3-209ENST00000494623 CLCN2P51788 898 aa11.02□□□□□ -0.64
CHMP3-209ENST00000494623 OR4D2P58180 307 aa11.02□□□□□ -0.64
CHMP3-209ENST00000494623 MTPNP58546 118 aa11.02□□□□□ -0.64
CHMP3-209ENST00000494623 Q6ZNB5 142 aa11.02□□□□□ -0.64
CHMP3-209ENST00000494623 TSPAN33Q86UF1 283 aa11.02□□□□□ -0.64
CHMP3-209ENST00000494623 HID1Q8IV36 788 aa11.02□□□□□ -0.64
CHMP3-209ENST00000494623 RMND5BQ96G75 393 aaPredicted RBP11.02□□□□□ -0.64
CHMP3-209ENST00000494623 ANKRD60Q9BZ19 345 aa11.02□□□□□ -0.64
CHMP3-209ENST00000494623 ACTL8Q9H568 366 aa11.02□□□□□ -0.64
CHMP3-209ENST00000494623 RPF2Q9H7B2 306 aaKnown RBP11.02□□□□□ -0.64
CHMP3-209ENST00000494623 LATS2Q9NRM7 1088 aa11.02□□□□□ -0.64
CHMP3-209ENST00000494623 MRPL17Q9NRX2 175 aaKnown RBP11.02□□□□□ -0.64
CHMP3-209ENST00000494623 FARSBQ9NSD9 589 aaKnown RBP11.02□□□□□ -0.64
CHMP3-209ENST00000494623 PNPLA3Q9NST1 481 aa11.02□□□□□ -0.64
CHMP3-209ENST00000494623 SMOXQ9NWM0 555 aa11.02□□□□□ -0.64
CHMP3-209ENST00000494623 WWOXQ9NZC7 414 aa11.02□□□□□ -0.64
CHMP3-209ENST00000494623 ANAPC2Q9UJX6 822 aa11.02□□□□□ -0.64
CHMP3-209ENST00000494623 PTBP2Q9UKA9 531 aaKnown RBP11.02□□□□□ -0.64
CHMP3-209ENST00000494623 TCRBV5S2A0A599 114 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 LATS1O95835 1130 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 GJA1P17302 382 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 RPS3P23396 243 aaKnown RBP eCLIP11.02□□□□□ -0.65
CHMP3-209ENST00000494623 ACRV1P26436 265 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 CD70P32970 193 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 CDH15P55291 814 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 LMAN2Q12907 356 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 TRAF3Q13114 568 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 SELPLGQ14242 412 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 SPATS1Q496A3 300 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 AASDHQ4L235 1098 aaPredicted RBP11.02□□□□□ -0.65
CHMP3-209ENST00000494623 DGKKQ5KSL6 1271 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 INTS11Q5TA45 600 aaKnown RBP11.02□□□□□ -0.65
CHMP3-209ENST00000494623 GLYATQ6IB77 296 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 ZSWIM9Q86XI8 627 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 PTRH1Q86Y79 214 aaKnown RBP11.02□□□□□ -0.65
CHMP3-209ENST00000494623 BBS7Q8IWZ6 715 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 ZBTB2Q8N680 514 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 TMIGD2Q96BF3 282 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 MTFMTQ96DP5 389 aaKnown RBP11.02□□□□□ -0.65
CHMP3-209ENST00000494623 HAUS8Q9BT25 410 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 C9orf16Q9BUW7 83 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 IL21Q9HBE4 155 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 TLR9Q9NR96 1032 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 HEBP1Q9NRV9 189 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 CFAP97Q9P2B7 532 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 ZNHIT2Q9UHR6 403 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 LSM7Q9UK45 103 aaKnown RBP11.02□□□□□ -0.65
CHMP3-209ENST00000494623 OARD1Q9Y530 152 aa11.02□□□□□ -0.65
CHMP3-209ENST00000494623 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.01□□□□□ -0.65
CHMP3-209ENST00000494623 DLGAP1O14490 977 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 GLUD1P00367 558 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 HRH2P25021 359 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 CCT8P50990 548 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 RPL38P63173 70 aaKnown RBP11.01□□□□□ -0.65
CHMP3-209ENST00000494623 HMGCS1Q01581 520 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 MERTKQ12866 999 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 CDKN3Q16667 212 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 DLEU7Q6UYE1 221 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 B3GNT6Q6ZMB0 384 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 SLC39A11Q8N1S5 342 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 GOLM1Q8NBJ4 401 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 PDPRQ8NCN5 879 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 CYGBQ8WWM9 190 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 RNF145Q96MT1 663 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 LRRC3Q9BY71 257 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 SEZ6LQ9BYH1 1024 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 CD244Q9BZW8 370 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 OPTCQ9UBM4 332 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 KLQ9UEF7 1012 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 PADI4Q9UM07 663 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 ST14Q9Y5Y6 855 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 GFRA2O00451 464 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 ACOX3O15254 700 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 CLIC3O95833 236 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 GNRH1P01148 92 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 ENO2P09104 434 aaPredicted RBP11.01□□□□□ -0.65
CHMP3-209ENST00000494623 CTSOP43234 321 aaPredicted RBP11.01□□□□□ -0.65
CHMP3-209ENST00000494623 DYNC1I2Q13409 638 aaKnown RBP11.01□□□□□ -0.65
CHMP3-209ENST00000494623 MAP7Q14244 749 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 PTGR1Q14914 329 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 ATP6AP1Q15904 470 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 ADRM1Q16186 407 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 GPRC6AQ5T6X5 926 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 MBOAT1Q6ZNC8 495 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 TCEAL8Q8IYN2 117 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 HS6ST3Q8IZP7 471 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 ADGRG2Q8IZP9 1017 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 ZNF786Q8N393 782 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 PACRGLQ8N7B6 248 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 MFSD2AQ8NA29 543 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 GPR26Q8NDV2 337 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 MAGEE2Q8TD90 523 aaPredicted RBP11.01□□□□□ -0.65
CHMP3-209ENST00000494623 ZNF296Q8WUU4 475 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms