RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ECT2LQ008S8 904 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 GRB7Q14451 532 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 KIF19Q2TAC6 998 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 FUT11Q495W5 492 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 FBXO46Q6PJ61 603 aaPredicted RBP13.57□□□□□ -0.24
VCP-207ENST00000493886 SYVN1Q86TM6 617 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 TSPAN33Q86UF1 283 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 TMEM25Q86YD3 366 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 SIX5Q8N196 739 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 VOPP1Q96AW1 172 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 PPP1R14BQ96C90 147 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 TUBGCP3Q96CW5 907 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 SLC29A1Q99808 456 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 HGH1Q9BTY7 390 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 NOL11Q9H8H0 719 aaKnown RBP13.57□□□□□ -0.24
VCP-207ENST00000493886 WBP1LQ9NX94 342 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 HECAQ9UBI9 543 aaPredicted RBP13.57□□□□□ -0.24
VCP-207ENST00000493886 POLG2Q9UHN1 485 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 BCAP29Q9UHQ4 241 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 GNPTGQ9UJJ9 305 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 TSR3Q9UJK0 312 aaKnown RBP13.57□□□□□ -0.24
VCP-207ENST00000493886 HS3ST2Q9Y278 367 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 HELZP42694 1942 aaKnown RBP13.57□□□□□ -0.24
VCP-207ENST00000493886 LAMA3Q16787 3333 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 TRBV5-4A0A0C4DH59 114 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 CXorf51AA0A1B0GTR3 108 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 FGBP02675 491 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 ITGB6P18564 788 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 GPX3P22352 226 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 ACRV1P26436 265 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 PCSK6P29122 969 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 TRIM25Q14258 630 aaKnown RBP13.57□□□□□ -0.24
VCP-207ENST00000493886 CHRNA6Q15825 494 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 C22orf39Q6P5X5 142 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 OR56A4Q8NGH8 313 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 ASB9Q96DX5 294 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 NUDT4Q9NZJ9 180 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 EIF2B4Q9UI10 523 aaKnown RBP13.57□□□□□ -0.24
VCP-207ENST00000493886 CRLS1Q9UJA2 301 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 ZNF225Q9UK10 706 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 ASB1Q9Y576 335 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 PRSS21Q9Y6M0 314 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 SLC4A7Q9Y6M7 1214 aa13.57□□□□□ -0.24
VCP-207ENST00000493886 NPIPB15A6NHN6 443 aaPredicted RBP13.56□□□□□ -0.24
VCP-207ENST00000493886 TRIM64CA6NLI5 447 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 NRP2O60462 931 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 RFPL2O75678 378 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 ESRRBO95718 433 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 PSMC3P17980 439 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 LBPP18428 481 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 SPAM1P38567 509 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 MAP7Q14244 749 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 TEAD2Q15562 447 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 RBBP7Q16576 425 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 ASTLQ6HA08 431 aaPredicted RBP13.56□□□□□ -0.24
VCP-207ENST00000493886 GRAMD4Q6IC98 578 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 SLC2A7Q6PXP3 512 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 FUNDC1Q8IVP5 155 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 CBARPQ8N350 705 aaPredicted RBP13.56□□□□□ -0.24
VCP-207ENST00000493886 MRPL43Q8N983 215 aaKnown RBP13.56□□□□□ -0.24
VCP-207ENST00000493886 LKAAEAR1Q8TD35 194 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 DLG3Q92796 817 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 ISG20Q96AZ6 181 aaKnown RBP13.56□□□□□ -0.24
VCP-207ENST00000493886 DGCR14Q96DF8 476 aaKnown RBP13.56□□□□□ -0.24
VCP-207ENST00000493886 LYSMD1Q96S90 227 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 C17orf80Q9BSJ5 609 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 CAAP1Q9H8G2 361 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 LIN28AQ9H9Z2 209 aaKnown RBP13.56□□□□□ -0.24
VCP-207ENST00000493886 CXXC1Q9P0U4 656 aaPredicted RBP13.56□□□□□ -0.24
VCP-207ENST00000493886 SARDHQ9UL12 918 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 FAM149AA5PLN7 773 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 E2F3O00716 465 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 GRM6O15303 877 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 HSPA8P11142 646 aaKnown RBP13.56□□□□□ -0.24
VCP-207ENST00000493886 HGFP14210 728 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 ZNF26P17031 533 aaPredicted RBP13.56□□□□□ -0.24
VCP-207ENST00000493886 SEMG2Q02383 582 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 LYPLAL1Q5VWZ2 237 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 CRTC1Q6UUV9 634 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 FRA10AC1Q70Z53 315 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 ADAMTSL2Q86TH1 951 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 CLDN19Q8N6F1 224 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 NUSAP1Q9BXS6 441 aaKnown RBP13.56□□□□□ -0.24
VCP-207ENST00000493886 SUV39H2Q9H5I1 410 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 EGFL7Q9UHF1 273 aa13.56□□□□□ -0.24
VCP-207ENST00000493886 HEMK1Q9Y5R4 338 aaPredicted RBP13.56□□□□□ -0.24
VCP-207ENST00000493886 ZNF106Q9H2Y7 1883 aaKnown RBP13.55□□□□□ -0.24
VCP-207ENST00000493886 MTCL1Q9Y4B5 1905 aaKnown RBP13.55□□□□□ -0.24
VCP-207ENST00000493886 HTR3EA5X5Y0 456 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 SAC3D1A6NKF1 404 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 NEDD8-MDP1E9PL57 170 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 H3BSA7 217 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 PLOD2O00469 737 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 NR5A2O00482 541 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 GIPC1O14908 333 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 AP1G1O43747 822 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 VPS4BO75351 444 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 MOSPD3O75425 235 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 UROSP10746 265 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 GRIA3P42263 894 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms