RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 PELOQ9BRX2 385 aaKnown RBP6.77□□□□□ -1.33
VPS13B-205ENST00000493587 FEM1AQ9BSK4 669 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 SYT11Q9BT88 431 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 TDRD3Q9H7E2 651 aaKnown RBP6.77□□□□□ -1.33
VPS13B-205ENST00000493587 VAT1LQ9HCJ6 419 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 TBC1D22BQ9NU19 505 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 THUMPD1Q9NXG2 353 aaKnown RBP6.77□□□□□ -1.33
VPS13B-205ENST00000493587 USE1Q9NZ43 259 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 TMEM181Q9P2C4 612 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 MKLN1Q9UL63 735 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 ING4Q9UNL4 249 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 PCDHB3Q9Y5E6 796 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 C17orf113A0A1B0GUU1 675 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 FTH1P02794 183 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 SHMT2P34897 504 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 PREPP48147 710 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 LIG4P49917 911 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 SERPINB9P50453 376 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 RAB13P51153 203 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 SLC12A3P55017 1021 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 NOMO3P69849 1222 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 C2orf80Q0P641 193 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 NOMO1Q15155 1222 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 FSCN1Q16658 493 aaKnown RBP6.77□□□□□ -1.33
VPS13B-205ENST00000493587 CYBRD1Q53TN4 286 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 SAMD4BQ5PRF9 694 aaKnown RBP6.77□□□□□ -1.33
VPS13B-205ENST00000493587 RBM48Q5RL73 367 aaKnown RBP6.77□□□□□ -1.33
VPS13B-205ENST00000493587 MACC1Q6ZN28 852 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 GADL1Q6ZQY3 521 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 MAVSQ7Z434 540 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 SLC22A9Q8IVM8 553 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 SLFN12Q8IYM2 578 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 ADGRF4Q8IZF3 695 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 OR6S1Q8NH40 331 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 METTL6Q8TCB7 284 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 CHAC2Q8WUX2 184 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 SMG7Q92540 1137 aaKnown RBP6.77□□□□□ -1.33
VPS13B-205ENST00000493587 RBM18Q96H35 190 aaKnown RBP6.77□□□□□ -1.33
VPS13B-205ENST00000493587 AHCYL2Q96HN2 611 aaKnown RBP6.77□□□□□ -1.33
VPS13B-205ENST00000493587 PIGSQ96S52 555 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 KCNS3Q9BQ31 491 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 ZCCHC2Q9C0B9 1178 aaKnown RBP6.77□□□□□ -1.33
VPS13B-205ENST00000493587 UNC93B1Q9H1C4 597 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 SPNS1Q9H2V7 528 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 SPAG4Q9NPE6 437 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 CCDC167Q9P0B6 97 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 COL20A1Q9P218 1284 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 UBQLN2Q9UHD9 624 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 GLS2Q9UI32 602 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 AGO1Q9UL18 857 aaKnown RBP6.77□□□□□ -1.33
VPS13B-205ENST00000493587 SLC6A14Q9UN76 642 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 KIAA1024Q9UPX6 916 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 CDYLQ9Y232 598 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 TEX46H3BTG2 121 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 GNGT2O14610 69 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 FPGTO14772 594 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 AIREO43918 545 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 ERN1O75460 977 aaKnown RBP6.76□□□□□ -1.33
VPS13B-205ENST00000493587 ATG12O94817 140 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 SGPL1O95470 568 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 LY86O95711 162 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 SPATA31C1P0DKV0 1188 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 CRHBPP24387 322 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 BAG6P46379 1132 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 FMO5P49326 533 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 INPP1P49441 399 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 GP2P55259 537 aaKnown RBP6.76□□□□□ -1.33
VPS13B-205ENST00000493587 BAMBIQ13145 260 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 GPR50Q13585 617 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 TFDP2Q14188 446 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 TRIP4Q15650 581 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-205ENST00000493587 KYAT1Q16773 422 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 BMT2Q1RMZ1 405 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 ZNF284Q2VY69 593 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 AGKQ53H12 422 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 C9orf152Q5JTZ5 239 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 ANKRD54Q6NXT1 300 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 ZBTB33Q86T24 672 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 EPHX4Q8IUS5 362 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 KRT78Q8N1N4 520 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 AVL9Q8NBF6 648 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 SRFBP1Q8NEF9 429 aaKnown RBP6.76□□□□□ -1.33
VPS13B-205ENST00000493587 WDR36Q8NI36 951 aaKnown RBP6.76□□□□□ -1.33
VPS13B-205ENST00000493587 TOP1MTQ969P6 601 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 MUL1Q969V5 352 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 ACSF2Q96CM8 615 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-205ENST00000493587 TEPSINQ96N21 525 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 PAPOLGQ9BWT3 736 aaKnown RBP6.76□□□□□ -1.33
VPS13B-205ENST00000493587 NIPAL2Q9H841 368 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 ZBTB20Q9HC78 741 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-205ENST00000493587 MIOXQ9UGB7 285 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 CPA4Q9UI42 421 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 ZNF639Q9UID6 485 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 ZNRF3Q9ULT6 936 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 PEX16Q9Y5Y5 336 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 MN1Q10571 1320 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-205ENST00000493587 FRMPD2Q68DX3 1309 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-205ENST00000493587 MRASO14807 208 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 LIASO43766 372 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 XPNPEP2O43895 674 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms