RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 OVCA2Q8WZ82 227 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 BEGAINQ9BUH8 593 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 IKZF5Q9H5V7 419 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 SLCO3A1Q9UIG8 710 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 MYO15AQ9UKN7 3530 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 LSM1O15116 133 aaKnown RBP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 VILLO15195 856 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 SH3BGRLO75368 114 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 LHCGRP22888 699 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 PSMA4P25789 261 aaKnown RBP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 PCSK6P29122 969 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 NEK2P51955 445 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 CPSF6Q16630 551 aaKnown RBP eCLIP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 AARS2Q5JTZ9 985 aaKnown RBP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 ACBD5Q5T8D3 534 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 CHST15Q7LFX5 561 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 TMEM199Q8N511 208 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 FIBCD1Q8N539 461 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 ZFP28Q8NHY6 868 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 SORCS1Q8WY21 1168 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 AURKBQ96GD4 344 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 VPS50Q96JG6 964 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 ZNF382Q96SR6 550 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 TBCDQ9BTW9 1192 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 OCEL1Q9H607 264 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 LTB4R2Q9NPC1 389 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 MRPL17Q9NRX2 175 aaKnown RBP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 GID8Q9NWU2 228 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 ANGPTL3Q9Y5C1 460 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 A0A1W2PQ67 120 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 H3BSA7 217 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 H7C0S8 307 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 TGM5O43548 720 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 DFNA5O60443 496 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 CXCL10P02778 98 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 PIM1P11309 404 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 ZNF7P17097 686 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 WEE1P30291 646 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 HLA-FP30511 346 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 CCR2P41597 374 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 YAP1P46937 504 aaKnown RBP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 CLCN4P51793 760 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 IST1P53990 364 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 HSPA14Q0VDF9 509 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 PLEKHG6Q3KR16 790 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 ATP13A5Q4VNC0 1218 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 INO80DQ53TQ3 878 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 OTUD3Q5T2D3 398 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 ARMC3Q5W041 872 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 CWF19L1Q69YN2 538 aaKnown RBP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 ASTLQ6HA08 431 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 OGFOD2Q6N063 350 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 TXNDC11Q6PKC3 985 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 SERPINA13PQ6UXR4 307 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 Q6ZNB5 142 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 OTOP2Q7RTS6 562 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 BEND7Q8N7W2 519 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 CHST14Q8NCH0 376 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 GFM2Q969S9 779 aaKnown RBP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 HOPXQ9BPY8 73 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 CORO1BQ9BR76 489 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 C2orf49Q9BVC5 232 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 CCM2LQ9NUG4 571 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 NUDT4Q9NZJ9 180 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 VPS9D1Q9Y2B5 631 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 SH3BP1Q9Y3L3 701 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 NOTCH4Q99466 2003 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 PFDN6O15212 129 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 CCL16O15467 120 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 EEDO75530 441 aaKnown RBP12.23□□□□□ -0.45
HMGN1-220ENST00000492280 S100BP04271 92 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-220ENST00000492280 CSF2RAP15509 400 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 ITGALP20701 1170 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 ACRV1P26436 265 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 BOP1Q14137 746 aaKnown RBP12.23□□□□□ -0.45
HMGN1-220ENST00000492280 ZXDCQ2QGD7 858 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-220ENST00000492280 ZIK1Q3SY52 487 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-220ENST00000492280 ANKRD34AQ69YU3 496 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 TBPL2Q6SJ96 375 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 Q6ZVU0 165 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 ADAMTSL2Q86TH1 951 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 ANKRD46Q86W74 232 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 VRK3Q8IV63 474 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 PHACTR4Q8IZ21 702 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 VOPP1Q96AW1 172 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 TCEAL4Q96EI5 215 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 TRMT2BQ96GJ1 504 aaKnown RBP12.23□□□□□ -0.45
HMGN1-220ENST00000492280 MPP4Q96JB8 637 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 RNF145Q96MT1 663 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 EFHD1Q9BUP0 239 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 BRINP2Q9C0B6 783 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 MAGEE1Q9HCI5 957 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 MRPL40Q9NQ50 206 aaKnown RBP12.23□□□□□ -0.45
HMGN1-220ENST00000492280 SLC6A13Q9NSD5 602 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 VAPAQ9P0L0 249 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 ACTR3BQ9P1U1 418 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 DNMT3BQ9UBC3 853 aaKnown RBP12.23□□□□□ -0.45
HMGN1-220ENST00000492280 KANSL1LA0AUZ9 987 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 LOC730098B7Z3J9 87 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 GSNP06396 782 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms