RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 TEX264Q9Y6I9 313 aa25.24■■□□□ 1.63
TTC3-223ENST00000492275 LILRA5A6NI73 299 aa25.23■■□□□ 1.63
TTC3-223ENST00000492275 SLC35G4P0C7Q5 338 aa25.23■■□□□ 1.63
TTC3-223ENST00000492275 MTHFD1P11586 935 aaKnown RBP25.23■■□□□ 1.63
TTC3-223ENST00000492275 HOXB3P14651 431 aaPredicted RBP25.23■■□□□ 1.63
TTC3-223ENST00000492275 ITGB6P18564 788 aa25.23■■□□□ 1.63
TTC3-223ENST00000492275 OGNP20774 298 aaKnown RBP25.23■■□□□ 1.63
TTC3-223ENST00000492275 CSF2RBP32927 897 aa25.23■■□□□ 1.63
TTC3-223ENST00000492275 ELK3P41970 407 aa25.23■■□□□ 1.63
TTC3-223ENST00000492275 ARL4CP56559 192 aa25.23■■□□□ 1.63
TTC3-223ENST00000492275 GPLD1P80108 840 aa25.23■■□□□ 1.63
TTC3-223ENST00000492275 ZFP36L1Q07352 338 aaKnown RBP25.23■■□□□ 1.63
TTC3-223ENST00000492275 TUBB2AQ13885 445 aa25.23■■□□□ 1.63
TTC3-223ENST00000492275 CRYMQ14894 314 aa25.23■■□□□ 1.63
TTC3-223ENST00000492275 HIF1AQ16665 826 aa25.23■■□□□ 1.63
TTC3-223ENST00000492275 PIM3Q86V86 326 aa25.23■■□□□ 1.63
TTC3-223ENST00000492275 LPGAT1Q92604 370 aa25.23■■□□□ 1.63
TTC3-223ENST00000492275 C12orf66Q96MD2 445 aa25.23■■□□□ 1.63
TTC3-223ENST00000492275 BIRC8Q96P09 236 aa25.23■■□□□ 1.63
TTC3-223ENST00000492275 NAT9Q9BTE0 207 aa25.23■■□□□ 1.63
TTC3-223ENST00000492275 TUBB2BQ9BVA1 445 aa25.23■■□□□ 1.63
TTC3-223ENST00000492275 CARD6Q9BX69 1037 aa25.23■■□□□ 1.63
TTC3-223ENST00000492275 SEMA6CQ9H3T2 930 aa25.23■■□□□ 1.63
TTC3-223ENST00000492275 C20orf96Q9NUD7 363 aaPredicted RBP25.23■■□□□ 1.63
TTC3-223ENST00000492275 AKAP13Q12802 2813 aa25.22■■□□□ 1.63
TTC3-223ENST00000492275 A0A1W2PNU3 283 aaPredicted RBP25.22■■□□□ 1.63
TTC3-223ENST00000492275 SLC5A10A0PJK1 596 aa25.22■■□□□ 1.63
TTC3-223ENST00000492275 S1PR4O95977 384 aa25.22■■□□□ 1.63
TTC3-223ENST00000492275 RPS3P23396 243 aaKnown RBP eCLIP25.22■■□□□ 1.633e-8■■■□□ 17.1
TTC3-223ENST00000492275 CCR7P32248 378 aa25.22■■□□□ 1.63
TTC3-223ENST00000492275 EPHA4P54764 986 aa25.22■■□□□ 1.63
TTC3-223ENST00000492275 RPA4Q13156 261 aa25.22■■□□□ 1.63
TTC3-223ENST00000492275 CBLBQ13191 982 aa25.22■■□□□ 1.63
TTC3-223ENST00000492275 THOC5Q13769 683 aaKnown RBP25.22■■□□□ 1.63
TTC3-223ENST00000492275 GPR18Q14330 331 aa25.22■■□□□ 1.63
TTC3-223ENST00000492275 BRD3Q15059 726 aa25.22■■□□□ 1.63
TTC3-223ENST00000492275 TRADDQ15628 312 aa25.22■■□□□ 1.63
TTC3-223ENST00000492275 CLPPQ16740 277 aaPredicted RBP25.22■■□□□ 1.63
TTC3-223ENST00000492275 ZNF789Q5FWF6 425 aa25.22■■□□□ 1.63
TTC3-223ENST00000492275 DUS1LQ6P1R4 473 aaKnown RBP25.22■■□□□ 1.63
TTC3-223ENST00000492275 UNQ6494/PRO21346Q6UXR6 183 aa25.22■■□□□ 1.63
TTC3-223ENST00000492275 SLITRK4Q8IW52 837 aa25.22■■□□□ 1.63
TTC3-223ENST00000492275 DENND6AQ8IWF6 608 aa25.22■■□□□ 1.63
TTC3-223ENST00000492275 KRT222Q8N1A0 295 aa25.22■■□□□ 1.63
TTC3-223ENST00000492275 OR10G6Q8NH81 332 aa25.22■■□□□ 1.63
TTC3-223ENST00000492275 GRAMD1AQ96CP6 724 aa25.22■■□□□ 1.63
TTC3-223ENST00000492275 LRRC1Q9BTT6 524 aa25.22■■□□□ 1.63
TTC3-223ENST00000492275 IMP3Q9NV31 184 aaKnown RBP25.22■■□□□ 1.63
TTC3-223ENST00000492275 OGFRQ9NZT2 677 aa25.22■■□□□ 1.63
TTC3-223ENST00000492275 CHMP2BQ9UQN3 213 aa25.22■■□□□ 1.63
TTC3-223ENST00000492275 UTP11Q9Y3A2 253 aaKnown RBP25.22■■□□□ 1.63
TTC3-223ENST00000492275 UBA6A0AVT1 1052 aaPredicted RBP25.21■■□□□ 1.63
TTC3-223ENST00000492275 E7ESA3 106 aa25.21■■□□□ 1.63
TTC3-223ENST00000492275 F8W8V4 182 aa25.21■■□□□ 1.63
TTC3-223ENST00000492275 NDC80O14777 642 aa25.21■■□□□ 1.63
TTC3-223ENST00000492275 LIN7AO14910 233 aaPredicted RBP25.21■■□□□ 1.63
TTC3-223ENST00000492275 TTC4O95801 387 aa25.21■■□□□ 1.63
TTC3-223ENST00000492275 CAPNS1P04632 268 aa25.21■■□□□ 1.63
TTC3-223ENST00000492275 F7P08709 466 aaPredicted RBP25.21■■□□□ 1.63
TTC3-223ENST00000492275 CCKBRP32239 447 aa25.21■■□□□ 1.63
TTC3-223ENST00000492275 INHBCP55103 352 aa25.21■■□□□ 1.63
TTC3-223ENST00000492275 CTBP1Q13363 440 aa25.21■■□□□ 1.63
TTC3-223ENST00000492275 MAP9Q49MG5 647 aa25.21■■□□□ 1.63
TTC3-223ENST00000492275 SPANXN3Q5MJ09 141 aa25.21■■□□□ 1.63
TTC3-223ENST00000492275 CTSL3PQ5NE16 218 aa25.21■■□□□ 1.63
TTC3-223ENST00000492275 ZNF470Q6ECI4 717 aa25.21■■□□□ 1.63
TTC3-223ENST00000492275 PTRHD1Q6GMV3 140 aaKnown RBP25.21■■□□□ 1.63
TTC3-223ENST00000492275 LRRC6Q86X45 466 aa25.21■■□□□ 1.63
TTC3-223ENST00000492275 RBM12BQ8IXT5 1001 aaKnown RBP25.21■■□□□ 1.63
TTC3-223ENST00000492275 LRRC39Q96DD0 335 aa25.21■■□□□ 1.63
TTC3-223ENST00000492275 AHCYL2Q96HN2 611 aaKnown RBP25.21■■□□□ 1.63
TTC3-223ENST00000492275 TMEM74Q96NL1 305 aa25.21■■□□□ 1.63
TTC3-223ENST00000492275 NRSN2Q9GZP1 204 aa25.21■■□□□ 1.63
TTC3-223ENST00000492275 TMEM9Q9P0T7 183 aa25.21■■□□□ 1.63
TTC3-223ENST00000492275 CRYL1Q9Y2S2 319 aa25.21■■□□□ 1.63
TTC3-223ENST00000492275 BHMG1C9JSJ3 638 aaPredicted RBP25.2■■□□□ 1.62
TTC3-223ENST00000492275 FMO4P31512 558 aa25.2■■□□□ 1.62
TTC3-223ENST00000492275 EIF3BP55884 814 aaKnown RBP25.2■■□□□ 1.62
TTC3-223ENST00000492275 SLC7A5Q01650 507 aa25.2■■□□□ 1.62
TTC3-223ENST00000492275 CALCOCO2Q13137 446 aa25.2■■□□□ 1.62
TTC3-223ENST00000492275 RTP5Q14D33 572 aa25.2■■□□□ 1.62
TTC3-223ENST00000492275 HSP90AA5PQ58FG0 334 aa25.2■■□□□ 1.62
TTC3-223ENST00000492275 RNF187Q5TA31 235 aaPredicted RBP25.2■■□□□ 1.62
TTC3-223ENST00000492275 UNC5AQ6ZN44 842 aa25.2■■□□□ 1.62
TTC3-223ENST00000492275 CNTNAP3BQ96NU0 1288 aa25.2■■□□□ 1.62
TTC3-223ENST00000492275 CNTNAP3Q9BZ76 1288 aa25.2■■□□□ 1.62
TTC3-223ENST00000492275 RAB17Q9H0T7 212 aa25.2■■□□□ 1.62
TTC3-223ENST00000492275 EPB41L5Q9HCM4 733 aa25.2■■□□□ 1.62
TTC3-223ENST00000492275 GNPTGQ9UJJ9 305 aa25.2■■□□□ 1.62
TTC3-223ENST00000492275 IGHV5-10-1A0A0J9YXX1 117 aa25.19■■□□□ 1.62
TTC3-223ENST00000492275 DUX1O43812 170 aa25.19■■□□□ 1.62
TTC3-223ENST00000492275 ERVK-10P10266 1014 aa25.19■■□□□ 1.62
TTC3-223ENST00000492275 AOAHP28039 575 aa25.19■■□□□ 1.62
TTC3-223ENST00000492275 MAPK9P45984 424 aa25.19■■□□□ 1.62
TTC3-223ENST00000492275 CD151P48509 253 aa25.19■■□□□ 1.62
TTC3-223ENST00000492275 ADARP55265 1226 aaKnown RBP25.19■■□□□ 1.62
TTC3-223ENST00000492275 PDIA2Q13087 525 aaKnown RBP25.19■■□□□ 1.62
TTC3-223ENST00000492275 BOP1Q14137 746 aaKnown RBP25.19■■□□□ 1.62
TTC3-223ENST00000492275 FASTKD3Q14CZ7 662 aaKnown RBP25.19■■□□□ 1.62
TTC3-223ENST00000492275 ZNF449Q6P9G9 518 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms