RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 MAP3K3Q99759 626 aa11.42□□□□□ -0.58
CACNA1C-228ENST00000492150 TREX2Q9BQ50 279 aaPredicted RBP11.42□□□□□ -0.58
CACNA1C-228ENST00000492150 SLX1AQ9BQ83 275 aa11.42□□□□□ -0.58
CACNA1C-228ENST00000492150 NUP85Q9BW27 656 aa11.42□□□□□ -0.58
CACNA1C-228ENST00000492150 ENKD1Q9H0I2 346 aa11.42□□□□□ -0.58
CACNA1C-228ENST00000492150 ZFYVE1Q9HBF4 777 aa11.42□□□□□ -0.58
CACNA1C-228ENST00000492150 FGF21Q9NSA1 209 aa11.42□□□□□ -0.58
CACNA1C-228ENST00000492150 AIPL1Q9NZN9 384 aa11.42□□□□□ -0.58
CACNA1C-228ENST00000492150 NFKBIL1Q9UBC1 381 aaPredicted RBP11.42□□□□□ -0.58
CACNA1C-228ENST00000492150 TRIM10Q9UDY6 481 aa11.42□□□□□ -0.58
CACNA1C-228ENST00000492150 SHOC2Q9UQ13 582 aa11.42□□□□□ -0.58
CACNA1C-228ENST00000492150 VPS13CQ709C8 3753 aa11.42□□□□□ -0.58
CACNA1C-228ENST00000492150 VEGFDO43915 354 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 KLHL41O60662 606 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 CDK14O94921 469 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 JCHAINP01591 159 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 PIRTP0C851 137 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 SKILP12757 684 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 KIR3DL1P43629 444 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 RRADP55042 308 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 ACY1Q03154 408 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 SLC10A2Q12908 348 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 GPS2Q13227 327 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 ANO6Q4KMQ2 910 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 ATP13A4Q4VNC1 1196 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 LCN10Q6JVE6 187 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 DUS1LQ6P1R4 473 aaKnown RBP11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 TMC3Q7Z5M5 1100 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 D2HGDHQ8N465 521 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 CNTD1Q8N815 330 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 SLC38A9Q8NBW4 561 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 GPR150Q8NGU9 434 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 GRHL3Q8TE85 626 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 TM9SF4Q92544 642 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 MR1Q95460 341 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 ADGRE3Q9BY15 652 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 CHST8Q9H2A9 424 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 TNFRSF10DQ9UBN6 386 aa11.41□□□□□ -0.58
CACNA1C-228ENST00000492150 A0A1W2PQJ5 194 aa11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 CPNE3O75131 537 aaKnown RBP11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 ALPPP05187 535 aa11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 GBE1Q04446 702 aa11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 KLHL30Q0D2K2 578 aa11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 FAM69BQ5VUD6 431 aa11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 IZUMO3Q5VZ72 239 aa11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 TMEM198Q66K66 360 aa11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 FCRL6Q6DN72 434 aa11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 KMT5CQ86Y97 462 aa11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 CPNE8Q86YQ8 564 aa11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 PQLC3Q8N755 202 aa11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 COG1Q8WTW3 980 aa11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 NUDT8Q8WV74 236 aa11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 MTFMTQ96DP5 389 aaKnown RBP11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 MAGEE1Q9HCI5 957 aa11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 RTN4Q9NQC3 1192 aaKnown RBP11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 RAD18Q9NS91 495 aa11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 KCND1Q9NSA2 647 aa11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 HAUS2Q9NVX0 235 aa11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 IP6K2Q9UHH9 426 aa11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 ZNF711Q9Y462 761 aa11.4□□□□□ -0.58
CACNA1C-228ENST00000492150 SPTBP11277 2137 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 TLCD2A6NGC4 264 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 A6NL46 340 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 F5H423 210 aaPredicted RBP11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 KCNK1O00180 336 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 SCRG1O75711 98 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 IPO13O94829 963 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 SLC4A1P02730 911 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 CAPN1P07384 714 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 PBX1P40424 430 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 TSFMP43897 325 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 YBX1P67809 324 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 TUBB4BP68371 445 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 HSD11B2P80365 405 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 PDE1BQ01064 536 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 TMEM115Q12893 351 aaPredicted RBP11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 ZBTB17Q13105 803 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 TUBB2AQ13885 445 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 GPR19Q15760 415 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 RPE65Q16518 533 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 ATP13A5Q4VNC0 1218 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 PLEKHS1Q5SXH7 462 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 PRAMEF17Q5VTA0 474 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 TRAPPC5Q8IUR0 188 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 ZADH2Q8N4Q0 377 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 ENDOVQ8N8Q3 282 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 FAF2Q96CS3 445 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 ZNF501Q96CX3 271 aaPredicted RBP11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 TRAPPC9Q96Q05 1148 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 VPS35Q96QK1 796 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 TUBB2BQ9BVA1 445 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 GPR63Q9BZJ6 419 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 THAP2Q9H0W7 228 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 LMBRD1Q9NUN5 540 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 ANO10Q9NW15 660 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 CHMP5Q9NZZ3 219 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 ANAPC7Q9UJX3 599 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 MXRA5Q9NR99 2828 aa11.39□□□□□ -0.59
CACNA1C-228ENST00000492150 SEC16AO15027 2179 aa11.38□□□□□ -0.59
CACNA1C-228ENST00000492150 UBA6A0AVT1 1052 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms