RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 SLC9B1P1A6NJY1 282 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 OR2AG2A6NM03 316 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 KLF7O75840 302 aaPredicted RBP12.87□□□□□ -0.35
USF1-206ENST00000491629 KLK3P07288 261 aaPredicted RBP12.87□□□□□ -0.35
USF1-206ENST00000491629 FAM228BP0C875 321 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 MX2P20592 715 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 SSR1P43307 286 aaKnown RBP12.87□□□□□ -0.35
USF1-206ENST00000491629 ARL4DP49703 201 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 FOXL2P58012 376 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 PDK2Q15119 407 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 KLHL35Q6PF15 583 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 TMEM220Q6QAJ8 160 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 NPNTQ6UXI9 565 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 NT5DC3Q86UY8 548 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 SYTL1Q8IYJ3 562 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 IQCKQ8N0W5 287 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 LILRA3Q8N6C8 439 aaPredicted RBP12.87□□□□□ -0.35
USF1-206ENST00000491629 GDAP1Q8TB36 358 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 CPT1BQ92523 772 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 NAP1L5Q96NT1 182 aaPredicted RBP12.87□□□□□ -0.35
USF1-206ENST00000491629 AGAP3Q96P47 875 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 RNF157Q96PX1 679 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 WWP1Q9H0M0 922 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 SLC25A51Q9H1U9 297 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 ZNF552Q9H707 407 aaPredicted RBP12.87□□□□□ -0.35
USF1-206ENST00000491629 IMP3Q9NV31 184 aaKnown RBP12.87□□□□□ -0.35
USF1-206ENST00000491629 ANO10Q9NW15 660 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 CHMP5Q9NZZ3 219 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 NENFQ9UMX5 172 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 SRPK3Q9UPE1 567 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 B3GNT3Q9Y2A9 372 aa12.87□□□□□ -0.35
USF1-206ENST00000491629 C3orf70A6NLC5 250 aaPredicted RBP12.86□□□□□ -0.35
USF1-206ENST00000491629 F5H423 210 aaPredicted RBP12.86□□□□□ -0.35
USF1-206ENST00000491629 MYO1FO00160 1098 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 KCNJ13O60928 360 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 NDST3O95803 873 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 VCLP18206 1134 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 POLR2CP19387 275 aaPredicted RBP12.86□□□□□ -0.35
USF1-206ENST00000491629 KDELR1P24390 212 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 VARSP26640 1264 aaKnown RBP12.86□□□□□ -0.35
USF1-206ENST00000491629 PBLDP30039 288 aaPredicted RBP12.86□□□□□ -0.35
USF1-206ENST00000491629 HMGCLP35914 325 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 NCF4Q15080 339 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 STX1AQ16623 288 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 HADHQ16836 314 aaKnown RBP12.86□□□□□ -0.35
USF1-206ENST00000491629 VWA5B1Q5TIE3 1220 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 IGFL3Q6UXB1 125 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 CUZD1Q86UP6 607 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 TTC13Q8NBP0 860 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 DDHD1Q8NEL9 900 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 BRSK1Q8TDC3 778 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 CLIP3Q96DZ5 547 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 OLFM3Q96PB7 478 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 KIR3DX1Q9H7L2 352 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 HAUS2Q9NVX0 235 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 UBP1Q9NZI7 540 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 IL17CQ9P0M4 197 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 C5AR2Q9P296 337 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 POMT2Q9UKY4 750 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 CSAG2Q9Y5P2 127 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 NF1P21359 2839 aa12.86□□□□□ -0.35
USF1-206ENST00000491629 TMEM150CB9EJG8 249 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 H3BMH7 237 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 HCRTR1O43613 425 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 BUD23O43709 281 aaKnown RBP12.85□□□□□ -0.35
USF1-206ENST00000491629 SGTAO43765 313 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 CNOT3O75175 753 aaKnown RBP12.85□□□□□ -0.35
USF1-206ENST00000491629 PMPCBO75439 489 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 PROSCO94903 275 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 ST6GAL1P15907 406 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 ELAVL4P26378 380 aaKnown RBP12.85□□□□□ -0.35
USF1-206ENST00000491629 CD68P34810 354 aaPredicted RBP12.85□□□□□ -0.35
USF1-206ENST00000491629 CHRNA4P43681 627 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 AP1B1Q10567 949 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 GTF2H3Q13889 308 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 PTPRCAPQ14761 206 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 SLC14A2Q15849 920 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 GPRC6AQ5T6X5 926 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 SLC9A4Q6AI14 798 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 KDELC1Q6UW63 502 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 FAM151BQ6UXP7 276 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 MRGPREQ86SM8 312 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 OOSP2Q86WS3 158 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 DTX3LQ8TDB6 740 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 RMDN2Q96LZ7 410 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 C12orf66Q96MD2 445 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 ACTR5Q9H9F9 607 aaPredicted RBP12.85□□□□□ -0.35
USF1-206ENST00000491629 GLOD4Q9HC38 313 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 CBX8Q9HC52 389 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 SOHLH2Q9NX45 425 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 PCDHGA10Q9Y5H3 936 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 HEY1Q9Y5J3 304 aa12.85□□□□□ -0.35
USF1-206ENST00000491629 DNMT3AQ9Y6K1 912 aaPredicted RBP12.85□□□□□ -0.35
USF1-206ENST00000491629 A0A1B0GTH6 734 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 LOC285095A0A1B0GVY8 99 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 E2F3O00716 465 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 OTX2P32243 289 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 LMAN1P49257 510 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 RRADP55042 308 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 XRCC4Q13426 336 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms