RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 SNTB1Q13884 538 aaKnown RBP4.75□□□□□ -1.65
RTN4-215ENST00000491592 DHX34Q14147 1143 aaKnown RBP4.75□□□□□ -1.65
RTN4-215ENST00000491592 GAMTQ14353 236 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 KRT31Q15323 416 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 RPS6KA1Q15418 735 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 PFKFB3Q16875 520 aaPredicted RBP4.75□□□□□ -1.65
RTN4-215ENST00000491592 LY6KQ17RY6 165 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 HFEQ30201 348 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 FUT11Q495W5 492 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 LACTB2Q53H82 288 aaPredicted RBP4.75□□□□□ -1.65
RTN4-215ENST00000491592 MANEALQ5VSG8 457 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 LIPMQ5VYY2 423 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 HMBOX1Q6NT76 420 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 ZNF530Q6P9A1 599 aaPredicted RBP4.75□□□□□ -1.65
RTN4-215ENST00000491592 TMEM270Q6UE05 265 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 CLEC2AQ6UVW9 174 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 C6orf89Q6UWU4 347 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 MFSD7Q6UXD7 560 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 USP49Q70CQ1 688 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 TUBA1AQ71U36 451 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 CHST9Q7L1S5 443 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 MRGPRGQ86SM5 289 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 PSTKQ8IV42 348 aaKnown RBP4.75□□□□□ -1.65
RTN4-215ENST00000491592 IFT20Q8IY31 132 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 KDM8Q8N371 416 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 MAB21L3Q8N8X9 362 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 DUSP19Q8WTR2 217 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 METTL21AQ8WXB1 218 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 TPD52L3Q96J77 140 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 CMTM3Q96MX0 182 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 MTMR9Q96QG7 549 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 MMS19Q96T76 1030 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 VN1R3Q9BXE9 311 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 MOV10L1Q9BXT6 1211 aaKnown RBP4.75□□□□□ -1.65
RTN4-215ENST00000491592 THAP2Q9H0W7 228 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 PLEKHA4Q9H4M7 779 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.75□□□□□ -1.65
RTN4-215ENST00000491592 RMND1Q9NWS8 449 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 TMOD3Q9NYL9 352 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.75□□□□□ -1.65
RTN4-215ENST00000491592 HDAC6Q9UBN7 1215 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 PACSIN3Q9UKS6 424 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 CDH7Q9ULB5 785 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 GUCA1BQ9UMX6 200 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 DAPP1Q9UN19 280 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 SNX6Q9UNH7 406 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 COMMD3-BMI1R4GMX3 469 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 SPACA6W5XKT8 324 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 PIK3C2AO00443 1686 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 MYH7P12883 1935 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 SLIT3O75094 1523 aa4.75□□□□□ -1.65
RTN4-215ENST00000491592 UBN2Q6ZU65 1347 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 FAM205AQ6ZU69 1335 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 MYO3BQ8WXR4 1341 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 MST1RQ04912 1400 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 SIPA1L3O60292 1781 aaPredicted RBP4.74□□□□□ -1.65
RTN4-215ENST00000491592 FAM47DPA6NHR8 397 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 GOLGA6L10A6NI86 522 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 ZAR1LA6NP61 321 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.74□□□□□ -1.65
RTN4-215ENST00000491592 RSPH10B2B2RC85 870 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 ZNF879B4DU55 563 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 GOLGA8SH3BPF8 625 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 E2F3O00716 465 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 CTDSP2O14595 271 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 KCNQ3O43525 872 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 PSMD10O75832 226 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 SEC14L2O76054 403 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 AKR7A3O95154 331 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 SIX3O95343 332 aaPredicted RBP4.74□□□□□ -1.65
RTN4-215ENST00000491592 DIRAS3O95661 229 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 ONECUT2O95948 504 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 GCP02774 474 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 MMP1P03956 469 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 ATP1A1P05023 1023 aaKnown RBP4.74□□□□□ -1.65
RTN4-215ENST00000491592 EIF2S1P05198 315 aaKnown RBP4.74□□□□□ -1.65
RTN4-215ENST00000491592 RSPH10BP0C881 870 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 KRT3P12035 628 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 RARGP13631 454 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 NCF1P14598 390 aaPredicted RBP4.74□□□□□ -1.65
RTN4-215ENST00000491592 ETS1P14921 441 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 ZNF24P17028 368 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 PROZP22891 400 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 ACAT1P24752 427 aaKnown RBP4.74□□□□□ -1.65
RTN4-215ENST00000491592 RBL1P28749 1068 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 CCR1P32246 355 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 PLA2G5P39877 138 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 PPP1R2P41236 205 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 GPD2P43304 727 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 CCR10P46092 362 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 STAT2P52630 851 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 INHBCP55103 352 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 CDH8P55286 799 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 MRPS15P82914 257 aaKnown RBP4.74□□□□□ -1.65
RTN4-215ENST00000491592 XRCC4Q13426 336 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 ALCAMQ13740 583 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 HNRNPDQ14103 355 aaKnown RBP4.74□□□□□ -1.65
RTN4-215ENST00000491592 IRF3Q14653 427 aa4.74□□□□□ -1.65
RTN4-215ENST00000491592 ZNF169Q14929 603 aaPredicted RBP4.74□□□□□ -1.65
RTN4-215ENST00000491592 PCLAFQ15004 111 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms