RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 SOAT2O75908 522 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 BCAS2O75934 225 aaPredicted RBP5.01□□□□□ -1.61
PTPRK-213ENST00000490332 PAPLNO95428 1278 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 IGLV3-27P01718 113 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 SNRPB2P08579 225 aaKnown RBP5.01□□□□□ -1.61
PTPRK-213ENST00000490332 ZDHHC11BP0C7U3 371 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 CCDC166P0CW27 439 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 CTSAP10619 480 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 PIM1P11309 404 aaPredicted RBP5.01□□□□□ -1.61
PTPRK-213ENST00000490332 POU3F2P20265 443 aaPredicted RBP5.01□□□□□ -1.61
PTPRK-213ENST00000490332 TACR2P21452 398 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 MPSTP25325 297 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 ARNTP27540 789 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 EPHA3P29320 983 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 OR1E1P30953 314 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 ARRB2P32121 409 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 AVPR1AP37288 418 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 ABL2P42684 1182 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 GLRBP48167 497 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 NUDT2P50583 147 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 SUOXP51687 545 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 CREB5Q02930 508 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 SLC10A7Q0GE19 358 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 TAF10Q12962 218 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 OLIG2Q13516 323 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 CCNIQ14094 377 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 LY6DQ14210 128 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 TRIM25Q14258 630 aaKnown RBP5.01□□□□□ -1.61
PTPRK-213ENST00000490332 CSHL1Q14406 222 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 TAF1AQ15573 450 aaPredicted RBP5.01□□□□□ -1.61
PTPRK-213ENST00000490332 DDR2Q16832 855 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 MMEL1Q495T6 779 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 AARS2Q5JTZ9 985 aaKnown RBP5.01□□□□□ -1.61
PTPRK-213ENST00000490332 SIRPB2Q5JXA9 342 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 SAMD4BQ5PRF9 694 aaKnown RBP5.01□□□□□ -1.61
PTPRK-213ENST00000490332 PERM1Q5SV97 790 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 FAM182AQ5T1J6 154 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 FAM171A1Q5VUB5 890 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 UGT3A1Q6NUS8 523 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 CNSTQ6PJW8 725 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 TXNDC11Q6PKC3 985 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 IZUMO2Q6UXV1 221 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 Q6ZS46 218 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 FRMD7Q6ZUT3 714 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 CHST9Q7L1S5 443 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 SPATA19Q7Z5L4 167 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 RTN4RL1Q86UN2 441 aaPredicted RBP5.01□□□□□ -1.61
PTPRK-213ENST00000490332 CUZD1Q86UP6 607 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 SNX32Q86XE0 403 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 ZNF354CQ86Y25 554 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 ZNF280BQ86YH2 543 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 PDSS2Q86YH6 399 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 ZDHHC13Q8IUH4 622 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 CEP97Q8IW35 865 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 ST13P4Q8IZP2 240 aaPredicted RBP5.01□□□□□ -1.61
PTPRK-213ENST00000490332 SLC39A11Q8N1S5 342 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 PQLC1Q8N2U9 271 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 SLC25A41Q8N5S1 370 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 ACVR1CQ8NER5 493 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 OR4L1Q8NH43 312 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 FBXO27Q8NI29 283 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 ARRDC2Q8TBH0 407 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 MAPK15Q8TD08 544 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 SMG7Q92540 1137 aaKnown RBP5.01□□□□□ -1.61
PTPRK-213ENST00000490332 HDAC10Q969S8 669 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 PLD4Q96BZ4 506 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 ROPN1LQ96C74 230 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 HMCESQ96FZ2 354 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 DUS3LQ96G46 650 aaKnown RBP5.01□□□□□ -1.61
PTPRK-213ENST00000490332 CLPTM1LQ96KA5 538 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 RPRD1AQ96P16 312 aaPredicted RBP5.01□□□□□ -1.61
PTPRK-213ENST00000490332 TMEM209Q96SK2 561 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 SEMA3CQ99985 751 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 CENPKQ9BS16 269 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 TTLL2Q9BWV7 592 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 NUF2Q9BZD4 464 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 TRIM15Q9C019 465 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 NOL6Q9H6R4 1146 aaKnown RBP5.01□□□□□ -1.61
PTPRK-213ENST00000490332 WDR55Q9H6Y2 383 aaPredicted RBP5.01□□□□□ -1.61
PTPRK-213ENST00000490332 WDR41Q9HAD4 459 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 LMAN1LQ9HAT1 526 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 CYP4F11Q9HBI6 524 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 C8orf4Q9NR00 106 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 MAN1C1Q9NR34 630 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 CATSPERZQ9NTU4 200 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 GID8Q9NWU2 228 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 TAS2R13Q9NYV9 303 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 GTSE1Q9NYZ3 720 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.01□□□□□ -1.61
PTPRK-213ENST00000490332 FRRS1LQ9P0K9 344 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 GMIPQ9P107 970 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 UXTQ9UBK9 157 aaPredicted RBP5.01□□□□□ -1.61
PTPRK-213ENST00000490332 CACNG4Q9UBN1 327 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 ADGRE2Q9UHX3 823 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 SARDHQ9UL12 918 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 RAB26Q9ULW5 256 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 MAFFQ9ULX9 164 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 NDRG2Q9UN36 371 aaKnown RBP5.01□□□□□ -1.61
PTPRK-213ENST00000490332 TBC1D30Q9Y2I9 924 aa5.01□□□□□ -1.61
PTPRK-213ENST00000490332 NDUFAF1Q9Y375 327 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms