RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 ADGRG4Q8IZF6 3080 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 KLHL33A6NCF5 533 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 KCNK1O00180 336 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 HNRNPRO43390 633 aaKnown RBP7.98□□□□□ -1.13
USP39-216ENST00000490193 KLHL41O60662 606 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 CYP1A2P05177 515 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 PIRTP0C851 137 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 MTHFD1P11586 935 aaKnown RBP7.98□□□□□ -1.13
USP39-216ENST00000490193 CDK11BP21127 795 aaKnown RBP7.98□□□□□ -1.13
USP39-216ENST00000490193 HMGCLP35914 325 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 HADHAP40939 763 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 KPNA2P52292 529 aaKnown RBP7.98□□□□□ -1.13
USP39-216ENST00000490193 SOX8P57073 446 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 CDK18Q07002 472 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 SLC10A2Q12908 348 aaPredicted RBP7.98□□□□□ -1.13
USP39-216ENST00000490193 ABRQ12979 859 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 ZBTB17Q13105 803 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 ATP1A4Q13733 1029 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 GTF2H3Q13889 308 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 MYBPC3Q14896 1274 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 NCF4Q15080 339 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 PLCL1Q15111 1095 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 PDK2Q15119 407 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 METRNLQ641Q3 311 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 ZNF385CQ66K41 422 aaPredicted RBP7.98□□□□□ -1.13
USP39-216ENST00000490193 FAM83HQ6ZRV2 1179 aaPredicted RBP7.98□□□□□ -1.13
USP39-216ENST00000490193 RAB43Q86YS6 212 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 SYTL1Q8IYJ3 562 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 CISD2Q8N5K1 135 aaKnown RBP7.98□□□□□ -1.13
USP39-216ENST00000490193 PQLC3Q8N755 202 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 DDHD1Q8NEL9 900 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 SGSM3Q96HU1 749 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 BTBD6Q96KE9 485 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 DHRS4Q9BTZ2 278 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 ZCCHC2Q9C0B9 1178 aaKnown RBP7.98□□□□□ -1.13
USP39-216ENST00000490193 THAP2Q9H0W7 228 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 SLC25A51Q9H1U9 297 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 KIR3DX1Q9H7L2 352 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 FANCEQ9HB96 536 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.98□□□□□ -1.13
USP39-216ENST00000490193 MAP10Q9P2G4 905 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 SLC24A2Q9UI40 661 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 POMT2Q9UKY4 750 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 ENTPD4Q9Y227 616 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 CCDC88CQ9P219 2028 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 CSMD2Q7Z408 3487 aa7.98□□□□□ -1.13
USP39-216ENST00000490193 RCCD1A6NED2 376 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 A6NL46 340 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 ZNF487B1APH4 448 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 MYO1FO00160 1098 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 MATN2O00339 956 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 POP7O75817 140 aaKnown RBP7.97□□□□□ -1.13
USP39-216ENST00000490193 KLF7O75840 302 aaPredicted RBP7.97□□□□□ -1.13
USP39-216ENST00000490193 IPO13O94829 963 aaKnown RBP7.97□□□□□ -1.13
USP39-216ENST00000490193 NDST3O95803 873 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 IGHEP01854 428 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 ALPPP05187 535 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 CTSCP53634 463 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 ADCY2Q08462 1091 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 ELOAQ14241 798 aaKnown RBP7.97□□□□□ -1.13
USP39-216ENST00000490193 NFE2L1Q14494 772 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 ATP13A4Q4VNC1 1196 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 LDLRAP1Q5SW96 308 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 PRAMEF17Q5VTA0 474 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 FAM69BQ5VUD6 431 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 LYPLAL1Q5VWZ2 237 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 ZDHHC20Q5W0Z9 365 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 HGSNATQ68CP4 663 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 Q6ZS92 163 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 MRGPREQ86SM8 312 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 NT5DC3Q86UY8 548 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 MAP7D3Q8IWC1 876 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 SRRM1Q8IYB3 904 aaKnown RBP7.97□□□□□ -1.13
USP39-216ENST00000490193 TTC30BQ8N4P2 665 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 RASGEF1AQ8N9B8 481 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 KCTD6Q8NC69 237 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 CCNYQ8ND76 341 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 ST6GALNAC3Q8NDV1 305 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 OR1L3Q8NH93 324 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 LRRN4Q8WUT4 740 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 UBE2Q2Q8WVN8 375 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 INPP5DQ92835 1189 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 CLIP3Q96DZ5 547 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 MOCOSQ96EN8 888 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 FER1L6-AS2Q96M78 137 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 ZNF830Q96NB3 372 aaPredicted RBP7.97□□□□□ -1.13
USP39-216ENST00000490193 TTC25Q96NG3 672 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 INSM2Q96T92 566 aaPredicted RBP7.97□□□□□ -1.13
USP39-216ENST00000490193 SPSB2Q99619 263 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 TLR10Q9BXR5 811 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 TRABDQ9H4I3 376 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 ZNF552Q9H707 407 aaPredicted RBP7.97□□□□□ -1.13
USP39-216ENST00000490193 ACTR5Q9H9F9 607 aaPredicted RBP7.97□□□□□ -1.13
USP39-216ENST00000490193 CBX8Q9HC52 389 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 IL26Q9NPH9 171 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 C1GALT1Q9NS00 363 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 IMP3Q9NV31 184 aaKnown RBP7.97□□□□□ -1.13
USP39-216ENST00000490193 ANO10Q9NW15 660 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 SMOXQ9NWM0 555 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 SOHLH2Q9NX45 425 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms