RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 GPS2Q13227 327 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 TOB2Q14106 344 aaPredicted RBP2.91□□□□□ -1.94
UBXN4-208ENST00000490163 R3HDM1Q15032 1099 aaKnown RBP2.91□□□□□ -1.94
UBXN4-208ENST00000490163 ME3Q16798 604 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 PPP6R3Q5H9R7 873 aaPredicted RBP2.91□□□□□ -1.94
UBXN4-208ENST00000490163 PHF19Q5T6S3 580 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 PLXDC2Q6UX71 529 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 CENPVQ7Z7K6 275 aaPredicted RBP2.91□□□□□ -1.94
UBXN4-208ENST00000490163 XYLT1Q86Y38 959 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 C10orf67Q8IYJ2 551 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 TDHQ8IZJ6 230 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 SYCP3Q8IZU3 236 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 GCSAMQ8N6F7 178 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 UXS1Q8NBZ7 420 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 SLC24A4Q8NFF2 622 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 MGARPQ8TDB4 240 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 TFAP2CQ92754 450 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 FBXL8Q96CD0 374 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 PBKQ96KB5 322 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 SGK494Q96LW2 274 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 PAIP2Q9BPZ3 127 aaKnown RBP2.91□□□□□ -1.94
UBXN4-208ENST00000490163 KRTAP4-12Q9BQ66 201 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 MMADHCQ9H3L0 296 aaPredicted RBP2.91□□□□□ -1.94
UBXN4-208ENST00000490163 MMRN2Q9H8L6 949 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 LARSQ9P2J5 1176 aaKnown RBP2.91□□□□□ -1.94
UBXN4-208ENST00000490163 LRWD1Q9UFC0 647 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 JRKLQ9Y4A0 524 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 RGPD2P0DJD1 1756 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 COL14A1Q05707 1796 aaKnown RBP2.9□□□□□ -1.94
UBXN4-208ENST00000490163 CTAGE9A4FU28 777 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 PRR5-ARHGAP8B1AHC4 643 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 ECI2O75521 394 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 ATP6AP2O75787 350 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 SOX30O94993 753 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 CTAGE8P0CG41 777 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 DRD4P21917 467 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 ITGB8P26012 769 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 MCM7P33993 719 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 LIPAP38571 399 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 WNT5AP41221 380 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 CAPZA1P52907 286 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 HNRNPH2P55795 449 aaKnown RBP2.9□□□□□ -1.94
UBXN4-208ENST00000490163 BLOC1S1P78537 153 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 PNRC1Q12796 327 aaPredicted RBP2.9□□□□□ -1.94
UBXN4-208ENST00000490163 LRMPQ12912 555 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 ABRQ12979 859 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 KLHL40Q2TBA0 621 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 DPPA4Q7L190 304 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 RRM2BQ7LG56 351 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 IQCHQ86VS3 1027 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 CTAGE4Q8IX94 777 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 FUKQ8N0W3 1084 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 SHC3Q92529 594 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 AKAP1Q92667 903 aaKnown RBP eCLIP2.9□□□□□ -1.94
UBXN4-208ENST00000490163 P3H4Q92791 437 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 ERLEC1Q96DZ1 483 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 FAM118BQ9BPY3 351 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 TTYH3Q9C0H2 523 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 Q9H8V8 135 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 COG4Q9H9E3 785 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 GOLGA2P5Q9HBQ8 144 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 PEMTQ9UBM1 199 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 CLIP2Q9UDT6 1046 aa2.9□□□□□ -1.94
UBXN4-208ENST00000490163 NIP7Q9Y221 180 aaKnown RBP eCLIP2.9□□□□□ -1.94
UBXN4-208ENST00000490163 ZMYM6O95789 1325 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 DLG5Q8TDM6 1919 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 LRP6O75581 1613 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 KDM3BQ7LBC6 1761 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 C13orf42A0A1B0GVH6 325 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 LEFTY2O00292 366 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 CLDN4O14493 209 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 FGF2P09038 288 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 OR52Z1P0C646 297 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 GPR12P47775 334 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 OR3A1P47881 315 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 PPP2CBP62714 309 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 PPP2CAP67775 309 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 RALGDSQ12967 914 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 PDIA5Q14554 519 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 TAZQ16635 292 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 KCTD11Q693B1 232 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 B3GNT6Q6ZMB0 384 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 POLNQ7Z5Q5 900 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 ADCK2Q7Z695 626 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 CAND1Q86VP6 1230 aaKnown RBP2.9□□□□□ -1.95
UBXN4-208ENST00000490163 SCYL3Q8IZE3 742 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 ANKRD20A12PQ8NF67 263 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 FAR1Q8WVX9 515 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 PIBF1Q8WXW3 757 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 ANKRD7Q92527 254 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 SPSB1Q96BD6 273 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 PHACTR3Q96KR7 559 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 TMEM47Q9BQJ4 181 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 THAP9Q9H5L6 903 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 TDRD3Q9H7E2 651 aaKnown RBP2.9□□□□□ -1.95
UBXN4-208ENST00000490163 MED4Q9NPJ6 270 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 TEKT2Q9UIF3 430 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 CAB39Q9Y376 341 aaPredicted RBP2.9□□□□□ -1.95
UBXN4-208ENST00000490163 POLR3AO14802 1390 aaPredicted RBP2.9□□□□□ -1.95
UBXN4-208ENST00000490163 BRD4O60885 1362 aaPredicted RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms