RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 MAGEA4P43358 317 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 AGTR2P50052 363 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 CLCNKBP51801 687 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 KIAA1024LP59773 190 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 HSF1Q00613 529 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 ALKBH1Q13686 389 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 CDONQ4KMG0 1287 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 KLHL26Q53HC5 615 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 BOLA3Q53S33 107 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 CYP4A22Q5TCH4 519 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 FAM171A1Q5VUB5 890 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 KRT79Q5XKE5 535 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 FBXL22Q6P050 247 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 SLC27A1Q6PCB7 646 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 TMEM182Q6ZP80 229 aaPredicted RBP3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 QSOX2Q6ZRP7 698 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 COLCA1Q6ZS62 124 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 PLEKHM3Q6ZWE6 761 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 MEPCEQ7L2J0 689 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 ADCK2Q7Z695 626 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 CENPVQ7Z7K6 275 aaPredicted RBP3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 TLK2Q86UE8 772 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 PIM3Q86V86 326 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 KLHL7Q8IXQ5 586 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 SCAIQ8N9R8 606 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 SLC5A11Q8WWX8 675 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 ZNF75CPQ92670 426 aaPredicted RBP3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 NXNL1Q96CM4 212 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 HDAC11Q96DB2 347 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 FERMT1Q9BQL6 677 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 TRMOQ9BU70 441 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 CINPQ9BW66 212 aaPredicted RBP3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 ZNF350Q9GZX5 532 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 COQ10BQ9H8M1 238 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 PRMT7Q9NVM4 692 aaPredicted RBP3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 DDX18Q9NVP1 670 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 TMEM248Q9NWD8 314 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 BABAM1Q9NWV8 329 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 PTBP2Q9UKA9 531 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 GMEB2Q9UKD1 530 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 MTMR6Q9Y217 621 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 WBP11Q9Y2W2 641 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 CMAHPQ9Y471 501 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 HEMK1Q9Y5R4 338 aaPredicted RBP3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 SIRT4Q9Y6E7 314 aaPredicted RBP3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 E9PCH4 1651 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 PTPRTO14522 1441 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 CAMSAP1Q5T5Y3 1602 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 RAB3GAP2Q9H2M9 1393 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 ACEP12821 1306 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 EFCAB6Q5THR3 1501 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 FAM135AQ9P2D6 1515 aa3.16□□□□□ -1.9
DEPDC1-204ENST00000489862 CBY3A6NI87 242 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 C2CD4BA6NLJ0 364 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 LRRC53A6NM62 1247 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 C2orf81A6NN90 581 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 B4DGG1 531 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 CXCL14O95715 111 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 TRUB2O95900 331 aaKnown RBP3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 LCATP04180 440 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 ALDOCP09972 364 aaKnown RBP3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 ANXA7P20073 488 aaKnown RBP3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 ACADLP28330 430 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 CHRNA3P32297 505 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 SERPINB6P35237 376 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 ATP5OP48047 213 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 RAB28P51157 221 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 RPS6KA3P51812 740 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 SLC37A1P57057 533 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 KRTAP10-12P60413 245 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 ACTR1AP61163 376 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 WDR5P61964 334 aaKnown RBP3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 UBE2HP62256 183 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 GFPT1Q06210 699 aaPredicted RBP3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 RUNX1T1Q06455 604 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 GOLGA8FQ08AF8 430 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 ACSM1Q08AH1 577 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 COX10Q12887 443 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 RPE65Q16518 533 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 MCMDC2Q4G0Z9 681 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 ARL13AQ5H913 290 aaPredicted RBP3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 SERTAD4-AS1Q5TG53 156 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 FBXO46Q6PJ61 603 aaPredicted RBP3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 ZYG11AQ6WRX3 759 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 TMEM200AQ86VY9 491 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 MAML2Q8IZL2 1156 aaPredicted RBP3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 GUF1Q8N442 669 aaKnown RBP3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 ANKRD13CQ8N6S4 541 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 L3MBTL4Q8NA19 623 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 OR7G3Q8NG95 312 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 TMEM255BQ8WV15 326 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 OVCA2Q8WZ82 227 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 ARHGEF26Q96DR7 871 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 SAMD8Q96LT4 415 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 CAMK1GQ96NX5 476 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 FCRL5Q96RD9 977 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 HNRNPABQ99729 332 aaKnown RBP3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 TXN2Q99757 166 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 OLFM1Q99784 485 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms