RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 GBX1Q14549 363 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 METRNLQ641Q3 311 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 PAQR3Q6TCH7 311 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 CRTC3Q6UUV7 619 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 WASH2PQ6VEQ5 465 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 SH2D5Q6ZV89 423 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 CMC1Q7Z7K0 106 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 ADAMTSL2Q86TH1 951 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 HID1Q8IV36 788 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 CEP97Q8IW35 865 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 CFAP206Q8IYR0 622 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 BANPQ8N9N5 519 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 SIDT2Q8NBJ9 832 aaKnown RBP10.84□□□□□ -0.67
HDLBP-242ENST00000488013 PHC3Q8NDX5 983 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 RHEBL1Q8TAI7 183 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 STAG3L4Q8TBR4 150 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 SREK1Q8WXA9 508 aaKnown RBP10.84□□□□□ -0.67
HDLBP-242ENST00000488013 OR1E3Q8WZA6 343 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 APOPT1Q96IL0 206 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 MRPL57Q9BQC6 102 aaKnown RBP10.84□□□□□ -0.67
HDLBP-242ENST00000488013 TRIM54Q9BYV2 358 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 TFB2MQ9H5Q4 396 aaKnown RBP10.84□□□□□ -0.67
HDLBP-242ENST00000488013 COG4Q9H9E3 785 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 CAB39LQ9H9S4 337 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 WASH6PQ9NQA3 447 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 SPASTQ9UBP0 616 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 CA5BQ9Y2D0 317 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 HEBP2Q9Y5Z4 205 aa10.84□□□□□ -0.67
HDLBP-242ENST00000488013 A0A1W2PPM1 405 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 SLC5A10A0PJK1 596 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 NEMP2A6NFY4 417 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 OR5K4A6NMS3 321 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 IQCF5A8MTL0 148 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 WISP3O95389 354 aaPredicted RBP10.83□□□□□ -0.68
HDLBP-242ENST00000488013 SLC35G4P0C7Q5 338 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 CCDC166P0CW27 439 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 JUNDP17535 347 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 NDUFS1P28331 727 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 HALP42357 657 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 RXRGP48443 463 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 TIAL1Q01085 375 aaKnown RBP eCLIP10.83□□□□□ -0.68
HDLBP-242ENST00000488013 ALG11Q2TAA5 492 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 CDKL4Q5MAI5 379 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 ZNF648Q5T619 568 aaPredicted RBP10.83□□□□□ -0.68
HDLBP-242ENST00000488013 LAIR1Q6GTX8 287 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 TTC23LQ6PF05 361 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 LVRNQ6Q4G3 990 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 PRR23BQ6ZRT6 265 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 ARMCX6Q7L4S7 300 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 CHST15Q7LFX5 561 aaPredicted RBP10.83□□□□□ -0.68
HDLBP-242ENST00000488013 C11orf96Q7Z7L8 435 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 CLEC14AQ86T13 490 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 PHACTR4Q8IZ21 702 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 SLC22A15Q8IZD6 547 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 KRT222Q8N1A0 295 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 SLC22A18ASQ8N1D0 253 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 PNPLA1Q8N8W4 532 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 RDH11Q8TC12 318 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 SKA2Q8WVK7 121 aaPredicted RBP10.83□□□□□ -0.68
HDLBP-242ENST00000488013 PIGKQ92643 395 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 KIAA1191Q96A73 305 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 ARL8AQ96BM9 186 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 CCDC126Q96EE4 140 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 LINGO1Q96FE5 620 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 KLC4Q9NSK0 619 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 PCMTD2Q9NV79 361 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 DNAJC28Q9NX36 388 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 PCOLCE2Q9UKZ9 415 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 SLC6A14Q9UN76 642 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 RUVBL2Q9Y230 463 aaKnown RBP10.83□□□□□ -0.68
HDLBP-242ENST00000488013 PLLPQ9Y342 182 aa10.83□□□□□ -0.68
HDLBP-242ENST00000488013 ATG2BQ96BY7 2078 aa10.82□□□□□ -0.68
HDLBP-242ENST00000488013 ZBTB14O43829 449 aa10.82□□□□□ -0.68
HDLBP-242ENST00000488013 TYROBPO43914 113 aa10.82□□□□□ -0.68
HDLBP-242ENST00000488013 FOXD2O60548 495 aaPredicted RBP10.82□□□□□ -0.68
HDLBP-242ENST00000488013 CATP04040 527 aaKnown RBP10.82□□□□□ -0.68
HDLBP-242ENST00000488013 HIST1H2AGP0C0S8 130 aaPredicted RBP10.82□□□□□ -0.68
HDLBP-242ENST00000488013 ACP5P13686 325 aa10.82□□□□□ -0.68
HDLBP-242ENST00000488013 ITGB6P18564 788 aa10.82□□□□□ -0.68
HDLBP-242ENST00000488013 TAC1P20366 129 aa10.82□□□□□ -0.68
HDLBP-242ENST00000488013 HIST1H2ADP20671 130 aa10.82□□□□□ -0.68
HDLBP-242ENST00000488013 CYP2A7P20853 494 aa10.82□□□□□ -0.68
HDLBP-242ENST00000488013 MAP4P27816 1152 aaKnown RBP10.82□□□□□ -0.68
HDLBP-242ENST00000488013 CSNK1EP49674 416 aaKnown RBP10.82□□□□□ -0.68
HDLBP-242ENST00000488013 AP1S2P56377 157 aa10.82□□□□□ -0.68
HDLBP-242ENST00000488013 NAA20P61599 178 aa10.82□□□□□ -0.68
HDLBP-242ENST00000488013 ASPHQ12797 758 aa10.82□□□□□ -0.68
HDLBP-242ENST00000488013 EIF2B5Q13144 721 aaKnown RBP10.82□□□□□ -0.68
HDLBP-242ENST00000488013 SRSF5Q13243 272 aaKnown RBP10.82□□□□□ -0.68
HDLBP-242ENST00000488013 CSHL1Q14406 222 aa10.82□□□□□ -0.68
HDLBP-242ENST00000488013 TUBB8Q3ZCM7 444 aa10.82□□□□□ -0.68
HDLBP-242ENST00000488013 ZNF658BQ4V348 819 aaPredicted RBP10.82□□□□□ -0.68
HDLBP-242ENST00000488013 PPM1JQ5JR12 505 aa10.82□□□□□ -0.68
HDLBP-242ENST00000488013 KCTD16Q68DU8 428 aa10.82□□□□□ -0.68
HDLBP-242ENST00000488013 UNC5DQ6UXZ4 953 aa10.82□□□□□ -0.68
HDLBP-242ENST00000488013 RD3Q7Z3Z2 195 aa10.82□□□□□ -0.68
HDLBP-242ENST00000488013 PIM3Q86V86 326 aa10.82□□□□□ -0.68
HDLBP-242ENST00000488013 GKN2Q86XP6 184 aa10.82□□□□□ -0.68
HDLBP-242ENST00000488013 CPNE9Q8IYJ1 553 aa10.82□□□□□ -0.68
HDLBP-242ENST00000488013 C4orf33Q8N1A6 199 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms