RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 RPE65Q16518 533 aa14.33□□□□□ -0.12
LIMS3-205ENST00000487150 KCTD19Q17RG1 926 aaPredicted RBP14.33□□□□□ -0.12
LIMS3-205ENST00000487150 TMEM26Q6ZUK4 368 aa14.33□□□□□ -0.12
LIMS3-205ENST00000487150 OTOAQ7RTW8 1153 aa14.33□□□□□ -0.12
LIMS3-205ENST00000487150 GALNT7Q86SF2 657 aa14.33□□□□□ -0.12
LIMS3-205ENST00000487150 PDZD3Q86UT5 571 aa14.33□□□□□ -0.12
LIMS3-205ENST00000487150 LPGAT1Q92604 370 aa14.33□□□□□ -0.12
LIMS3-205ENST00000487150 CERS2Q96G23 380 aa14.33□□□□□ -0.12
LIMS3-205ENST00000487150 C12orf66Q96MD2 445 aa14.33□□□□□ -0.12
LIMS3-205ENST00000487150 FCRL3Q96P31 734 aaPredicted RBP14.33□□□□□ -0.12
LIMS3-205ENST00000487150 WWP1Q9H0M0 922 aa14.33□□□□□ -0.12
LIMS3-205ENST00000487150 MVB12BQ9H7P6 319 aa14.33□□□□□ -0.12
LIMS3-205ENST00000487150 SLC40A1Q9NP59 571 aa14.33□□□□□ -0.12
LIMS3-205ENST00000487150 FAM114A2Q9NRY5 505 aa14.33□□□□□ -0.12
LIMS3-205ENST00000487150 NSMCE4AQ9NXX6 385 aa14.33□□□□□ -0.12
LIMS3-205ENST00000487150 FAM8A1Q9UBU6 413 aa14.33□□□□□ -0.12
LIMS3-205ENST00000487150 MTRF1LQ9UGC7 380 aaKnown RBP14.33□□□□□ -0.12
LIMS3-205ENST00000487150 CORO1CQ9ULV4 474 aaPredicted RBP14.33□□□□□ -0.12
LIMS3-205ENST00000487150 CHMP2BQ9UQN3 213 aa14.33□□□□□ -0.12
LIMS3-205ENST00000487150 TEX264Q9Y6I9 313 aa14.33□□□□□ -0.12
LIMS3-205ENST00000487150 IGHV1OR21-1A0A087WYE8 117 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 TMEM8BA6NDV4 472 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 OR52A4PA6NMU1 304 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 E5RI56 91 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 CSO75390 466 aaKnown RBP14.32□□□□□ -0.12
LIMS3-205ENST00000487150 GSTA2P09210 222 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 SLC19A1P41440 591 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 ELK3P41970 407 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 MLLT3P42568 568 aaPredicted RBP14.32□□□□□ -0.12
LIMS3-205ENST00000487150 MAPK9P45984 424 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 INHBCP55103 352 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 EIF3BP55884 814 aaKnown RBP14.32□□□□□ -0.12
LIMS3-205ENST00000487150 CCL7P80098 99 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 SEMA3AQ14563 771 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 CLCA4Q14CN2 919 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 PLCL1Q15111 1095 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 ISXQ2M1V0 245 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 TTLL9Q3SXZ7 439 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 STEAP4Q687X5 459 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 WDR74Q6RFH5 385 aaPredicted RBP14.32□□□□□ -0.12
LIMS3-205ENST00000487150 FAM83HQ6ZRV2 1179 aaPredicted RBP14.32□□□□□ -0.12
LIMS3-205ENST00000487150 PLXDC1Q8IUK5 500 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 CNTN4Q8IWV2 1026 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 OR4D9Q8NGE8 314 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 PYROXD1Q8WU10 500 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 SEC14L1Q92503 715 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 ART4Q93070 314 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 CFAP36Q96G28 342 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 NRSN2Q9GZP1 204 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 P2RY12Q9H244 342 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 KIR3DX1Q9H7L2 352 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 PPANQ9NQ55 473 aaKnown RBP14.32□□□□□ -0.12
LIMS3-205ENST00000487150 GRHL1Q9NZI5 618 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 ZNF624Q9P2J8 865 aaPredicted RBP14.32□□□□□ -0.12
LIMS3-205ENST00000487150 KLHL42Q9P2K6 505 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 RABGEF1Q9UJ41 708 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 KLK13Q9UKR3 277 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 FBXO5Q9UKT4 447 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 PSMD13Q9UNM6 376 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 WDR37Q9Y2I8 494 aa14.32□□□□□ -0.12
LIMS3-205ENST00000487150 SPTBN2O15020 2390 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 TRBV23OR9-2A0A075B6M9 112 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 GOLGA8KD6RF30 607 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 GOLGA8TH3BQL2 631 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 HGSO14964 777 aaPredicted RBP14.31□□□□□ -0.12
LIMS3-205ENST00000487150 TP73O15350 636 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 SPAG6O75602 509 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 ATP5DP30049 168 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 SLC1A2P43004 574 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 PLTPP55058 493 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 OR1D5P58170 312 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 TARDBPQ13148 414 aaKnown RBP eCLIP14.31□□□□□ -0.12
LIMS3-205ENST00000487150 AMZ1Q400G9 498 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 ZNF658BQ4V348 819 aaPredicted RBP14.31□□□□□ -0.12
LIMS3-205ENST00000487150 MSS51Q4VC12 460 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 HSP90AA5PQ58FG0 334 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 PLEKHS1Q5SXH7 462 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 CAPRIN2Q6IMN6 1127 aaKnown RBP14.31□□□□□ -0.12
LIMS3-205ENST00000487150 UNC5AQ6ZN44 842 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 LDB1Q86U70 411 aaPredicted RBP14.31□□□□□ -0.12
LIMS3-205ENST00000487150 SFTPA2Q8IWL1 248 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 ZBED8Q8IZ13 594 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 LSMEM2Q8N112 164 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 AGGF1Q8N302 714 aaeCLIP14.31□□□□□ -0.12
LIMS3-205ENST00000487150 FBXO36Q8NEA4 188 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 ACVR1CQ8NER5 493 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 CDKL2Q92772 493 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 KCNJ9Q92806 393 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 CCDC97Q96F63 343 aaPredicted RBP14.31□□□□□ -0.12
LIMS3-205ENST00000487150 LIN37Q96GY3 246 aaPredicted RBP14.31□□□□□ -0.12
LIMS3-205ENST00000487150 RMDN2Q96LZ7 410 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 OR52A5Q9H2C5 316 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 SCHIP1Q9P0W5 487 aaPredicted RBP14.31□□□□□ -0.12
LIMS3-205ENST00000487150 POLG2Q9UHN1 485 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 PRSS21Q9Y6M0 314 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 NCOR2Q9Y618 2525 aa14.31□□□□□ -0.12
LIMS3-205ENST00000487150 CCDC187A0A096LP49 1063 aa14.3□□□□□ -0.12
LIMS3-205ENST00000487150 A0A1W2PQM1 296 aa14.3□□□□□ -0.12
LIMS3-205ENST00000487150 SLC5A10A0PJK1 596 aa14.3□□□□□ -0.12
LIMS3-205ENST00000487150 MATN2O00339 956 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms