RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 GAPDHSO14556 408 aaPredicted RBP6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 STX7O15400 261 aaKnown RBP6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 BUD23O43709 281 aaKnown RBP6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 RAD1O60671 282 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 SNX2O60749 519 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 MTX2O75431 263 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 DNAJB5O75953 348 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 F3P13726 295 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 ZNF7P17097 686 aaPredicted RBP6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 LPOP22079 712 aaPredicted RBP6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 CD1CP29017 333 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 LIMK2P53671 638 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 KRTAP10-9P60411 292 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 GPLD1P80108 840 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 PDE1BQ01064 536 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 TMEM115Q12893 351 aaPredicted RBP6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 OLIG2Q13516 323 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 TRA2AQ13595 282 aaKnown RBP eCLIP6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 GTF2H3Q13889 308 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 KIR2DS5Q14953 304 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 TAF1AQ15573 450 aaPredicted RBP6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 INPP5JQ15735 1006 aaPredicted RBP6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 CHRNA6Q15825 494 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 PLA2G4EQ3MJ16 856 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 KHDC1Q4VXA5 237 aaKnown RBP6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 LDLRAP1Q5SW96 308 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 PHF19Q5T6S3 580 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 SEL1L2Q5TEA6 688 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 FAM151BQ6UXP7 276 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 ARHGEF18Q6ZSZ5 1173 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 SLC9B2Q86UD5 537 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 ZNF547Q8IVP9 402 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 KLHDC8BQ8IXV7 354 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 Q8NA96 180 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 AVL9Q8NBF6 648 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 DDHD1Q8NEL9 900 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 OR4D9Q8NGE8 314 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 OR10G6Q8NH81 332 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 GDAP1Q8TB36 358 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 SLC35B2Q8TB61 432 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 BRSK1Q8TDC3 778 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 SH3KBP1Q96B97 665 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 LRRC45Q96CN5 670 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 CCDC74BQ96LY2 380 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 TTC25Q96NG3 672 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 SLC38A3Q99624 504 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 CMKLR1Q99788 373 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 TBL1YQ9BQ87 522 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 APOL2Q9BQE5 337 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 TIMM29Q9BSF4 260 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 TRIM55Q9BYV6 548 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 ZCCHC2Q9C0B9 1178 aaKnown RBP6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 ZMYND15Q9H091 742 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 ARNT2Q9HBZ2 717 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 SARS2Q9NP81 518 aaKnown RBP6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 KLC4Q9NSK0 619 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 SMOXQ9NWM0 555 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 OCIAD1Q9NX40 245 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 AKAP7Q9P0M2 348 aaPredicted RBP6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 SLC23A2Q9UGH3 650 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 GUCA1BQ9UMX6 200 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 R3HDM2Q9Y2K5 976 aaKnown RBP6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 ARL5AQ9Y689 179 aa6.31□□□□□ -1.4
CTDSPL-208ENST00000486978 TCRBV7S2A1N4TA0A589 114 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 LILRA5A6NI73 299 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 PDZK1P1A8MUH7 402 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 HGSO14964 777 aaPredicted RBP6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 GPR39O43194 453 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 HNRNPRO43390 633 aaKnown RBP6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 UGT1A9O60656 530 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 KCNJ13O60928 360 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 PRAMEF1O95521 474 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 CRTAMO95727 393 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 VCLP18206 1134 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 XRCC1P18887 633 aaPredicted RBP6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 UGT1A6P19224 532 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 UGT1A1P22309 533 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 UGT1A4P22310 534 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 CD82P27701 267 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 CSF2RBP32927 897 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 HADHAP40939 763 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 PPM1FP49593 454 aaPredicted RBP6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 ATP1A2P50993 1020 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 EPHA4P54764 986 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 UBE2IP63279 158 aaKnown RBP6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 NFATC2Q13469 925 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 PTPRCAPQ14761 206 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 PARP6Q2NL67 630 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 P3H1Q32P28 736 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 GPRC6AQ5T6X5 926 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 NKAIN2Q5VXU1 208 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 KCTD11Q693B1 232 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 DENND5AQ6IQ26 1287 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 TMEM71Q6P5X7 295 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 WASH2PQ6VEQ5 465 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 ZNF662Q6ZS27 426 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 C11orf96Q7Z7L8 435 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 ZNF761Q86XN6 746 aaPredicted RBP6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 TRAPPC5Q8IUR0 188 aa6.3□□□□□ -1.4
CTDSPL-208ENST00000486978 SLC34A3Q8N130 599 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms