RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 TOR1BO14657 336 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 FPGTO14772 594 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 NUAK1O60285 661 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 PLIN3O60664 434 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 EDF1O60869 148 aaKnown RBP11.12□□□□□ -0.63
SND1-212ENST00000485871 GPC4O75487 556 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 TRIM16O95361 564 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 FTH1P02794 183 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 LTA4HP09960 611 aaKnown RBP11.12□□□□□ -0.63
SND1-212ENST00000485871 GPR89BP0CG08 455 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 CCDC166P0CW27 439 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 TROVE2P10155 538 aaKnown RBP eCLIP11.12□□□□□ -0.63
SND1-212ENST00000485871 CD1DP15813 335 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 ITGB6P18564 788 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 CHRM3P20309 590 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 AKT2P31751 481 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 FNTBP49356 437 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 CSHL1Q14406 222 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 NFATC4Q14934 902 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 USP39Q53GS9 565 aaKnown RBP11.12□□□□□ -0.63
SND1-212ENST00000485871 ACSBG2Q5FVE4 666 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 SPDYAQ5MJ70 313 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 N4BP2L1Q5TBK1 243 aaPredicted RBP11.12□□□□□ -0.63
SND1-212ENST00000485871 UGT3A1Q6NUS8 523 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 C16orf46Q6P387 395 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 TMEM220Q6QAJ8 160 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 SLC36A4Q6YBV0 504 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 CYHR1Q6ZMK1 362 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 ISCA2Q86U28 154 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 C1orf210Q8IVY1 113 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 SPATA6LQ8N4H0 392 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 OXR1Q8N573 874 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 C1orf216Q8TAB5 229 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 ZNF75CPQ92670 426 aaPredicted RBP11.12□□□□□ -0.63
SND1-212ENST00000485871 INPP5DQ92835 1189 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 PTERQ96BW5 349 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 PDLIM5Q96HC4 596 aaKnown RBP11.12□□□□□ -0.63
SND1-212ENST00000485871 SPACA7Q96KW9 195 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 RASSF4Q9H2L5 321 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 SYTL2Q9HCH5 934 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 TRMT6Q9UJA5 497 aaKnown RBP11.12□□□□□ -0.63
SND1-212ENST00000485871 TLK1Q9UKI8 766 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 PNMA8BQ9ULN7 279 aaPredicted RBP11.12□□□□□ -0.63
SND1-212ENST00000485871 USH1CQ9Y6N9 552 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 EPG5Q9HCE0 2579 aa11.12□□□□□ -0.63
SND1-212ENST00000485871 NCOR2Q9Y618 2525 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 TMEM131Q92545 1883 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 C17orf113A0A1B0GUU1 675 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 A0A1W2PR77 199 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 EIF3FO00303 357 aaPredicted RBP11.11□□□□□ -0.63
SND1-212ENST00000485871 BIRC5O15392 142 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 LAMTOR5O43504 91 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 ZBTB14O43829 449 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 MAGEC1O60732 1142 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 DCTN3O75935 186 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 ATP5HO75947 161 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 SLCO2B1O94956 709 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 TGDSO95455 350 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 CD27P26842 260 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 YPEL5P62699 121 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 PPARDQ03181 441 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 ACTN3Q08043 901 aaPredicted RBP11.11□□□□□ -0.63
SND1-212ENST00000485871 SETDB1Q15047 1291 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 TSNAXIP1Q2TAA8 658 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 PLEKHS1Q5SXH7 462 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 ATG16L1Q676U5 607 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 LRRC8EQ6NSJ5 796 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 NAPRTQ6XQN6 538 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 TBC1D1Q86TI0 1168 aaPredicted RBP11.11□□□□□ -0.63
SND1-212ENST00000485871 LONP2Q86WA8 852 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 VRK3Q8IV63 474 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 SLC22A18ASQ8N1D0 253 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 FSTL5Q8N475 847 aaPredicted RBP11.11□□□□□ -0.63
SND1-212ENST00000485871 ZBTB2Q8N680 514 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 DEFB119Q8N690 84 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 EEF1AKMT1Q8WVE0 214 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 DNASE2BQ8WZ79 361 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 ZNF514Q96K75 400 aaPredicted RBP11.11□□□□□ -0.63
SND1-212ENST00000485871 SLC6A18Q96N87 628 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 FAM111AQ96PZ2 611 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 ATOH8Q96SQ7 321 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 CCM2Q9BSQ5 444 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 DERL2Q9GZP9 239 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 DUSP15Q9H1R2 295 aaPredicted RBP11.11□□□□□ -0.63
SND1-212ENST00000485871 MANSC1Q9H8J5 431 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 RMI1Q9H9A7 625 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 FGF22Q9HCT0 170 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 MLXIPLQ9NP71 852 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 SARS2Q9NP81 518 aaKnown RBP11.11□□□□□ -0.63
SND1-212ENST00000485871 FBXO4Q9UKT5 387 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 RUVBL2Q9Y230 463 aaKnown RBP11.11□□□□□ -0.63
SND1-212ENST00000485871 DNMT3AQ9Y6K1 912 aaPredicted RBP11.11□□□□□ -0.63
SND1-212ENST00000485871 R4GN57 208 aa11.11□□□□□ -0.63
SND1-212ENST00000485871 CFAP73A6NFT4 308 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 MGAT4DA6NG13 374 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 F8W8V4 182 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 G3V2L1 256 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 H0YHG0 523 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 TK2O00142 265 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 CACNB4O00305 520 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms