RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 WDCPQ9H6R7 721 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 LHX9Q9NQ69 397 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 ACTR10Q9NZ32 417 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 COPG2Q9UBF2 871 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 LNPEPQ9UIQ6 1025 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 PADI1Q9ULC6 663 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 SUFUQ9UMX1 484 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 NTNG1Q9Y2I2 539 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 ATP8A1Q9Y2Q0 1164 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 MN1Q10571 1320 aaPredicted RBP6.5□□□□□ -1.37
SMC4-217ENST00000485867 PCM1Q15154 2024 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 CFAP69A5D8W1 941 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 E2F3O00716 465 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 TEX33O43247 280 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 SRGAP2O75044 1071 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 CPP00450 1065 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 SYT1P21579 422 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 PTPN4P29074 926 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 HNRNPH3P31942 346 aaKnown RBP6.5□□□□□ -1.37
SMC4-217ENST00000485867 GFRA1P56159 465 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 HDAC4P56524 1084 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 ART3Q13508 389 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 PEX6Q13608 980 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 IL11RAQ14626 422 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 MIIPQ5JXC2 388 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 MRM1Q6IN84 353 aaKnown RBP6.5□□□□□ -1.37
SMC4-217ENST00000485867 PNCKQ6P2M8 343 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 ZNF517Q6ZMY9 492 aaPredicted RBP6.5□□□□□ -1.37
SMC4-217ENST00000485867 FAM183BPQ6ZVS7 135 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 SLC26A9Q7LBE3 791 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 SYVN1Q86TM6 617 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 RASGRP3Q8IV61 690 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 PPIL6Q8IXY8 311 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 SFRP1Q8N474 314 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 HCAR2Q8TDS4 363 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 UBE2Q2Q8WVN8 375 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 INPP5DQ92835 1189 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 PGAP3Q96FM1 320 aaPredicted RBP6.5□□□□□ -1.37
SMC4-217ENST00000485867 C1orf159Q96HA4 380 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 LCORQ96JN0 433 aaPredicted RBP6.5□□□□□ -1.37
SMC4-217ENST00000485867 CCDC140Q96MF4 163 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 C8orf49Q96NF6 230 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 METTL14Q9HCE5 456 aaKnown RBP6.5□□□□□ -1.37
SMC4-217ENST00000485867 PHPT1Q9NRX4 125 aaPredicted RBP6.5□□□□□ -1.37
SMC4-217ENST00000485867 GPR83Q9NYM4 423 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 LHX3Q9UBR4 397 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 G3BP2Q9UN86 482 aaKnown RBP6.5□□□□□ -1.37
SMC4-217ENST00000485867 OSGIN2Q9Y236 505 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 B3GNT3Q9Y2A9 372 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 COA3Q9Y2R0 106 aaPredicted RBP6.5□□□□□ -1.37
SMC4-217ENST00000485867 PLEKHM1Q9Y4G2 1056 aa6.5□□□□□ -1.37
SMC4-217ENST00000485867 KLF2Q9Y5W3 355 aaPredicted RBP6.5□□□□□ -1.37
SMC4-217ENST00000485867 ZNF469Q96JG9 3925 aaPredicted RBP6.5□□□□□ -1.37
SMC4-217ENST00000485867 ANKRD12Q6UB98 2062 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 AKAP6Q13023 2319 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 TCRBV5S2A0A599 114 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 C9orf118A6NHY6 69 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 H7BY64 318 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 CETN3O15182 167 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 ZNF185O15231 689 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 MED7O43513 233 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 SPAG6O75602 509 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 LETM1O95202 739 aaPredicted RBP6.49□□□□□ -1.37
SMC4-217ENST00000485867 NADKO95544 446 aaPredicted RBP6.49□□□□□ -1.37
SMC4-217ENST00000485867 YEATS4O95619 227 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 EML2O95834 649 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 MT-ND3P03897 115 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 IVLP07476 585 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 PLEKP08567 350 aaPredicted RBP6.49□□□□□ -1.37
SMC4-217ENST00000485867 ELFN1P0C7U0 828 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 FGF5P12034 268 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 ZNF20P17024 532 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 BPIP17213 487 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 LPOP22079 712 aaPredicted RBP6.49□□□□□ -1.37
SMC4-217ENST00000485867 ERCC5P28715 1186 aaPredicted RBP6.49□□□□□ -1.37
SMC4-217ENST00000485867 MAPK9P45984 424 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 SULT1E1P49888 294 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 GFERP55789 205 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 KRTAP10-9P60411 292 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 RHOAP61586 193 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 HHEXQ03014 270 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 DEUP1Q05D60 604 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 NFATC2Q13469 925 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 EMC4Q5J8M3 183 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 MANEALQ5VSG8 457 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 RESP18Q5W5W9 173 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 BRAT1Q6PJG6 821 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 C11orf57Q6ZUT1 292 aaPredicted RBP6.49□□□□□ -1.37
SMC4-217ENST00000485867 RRAGAQ7L523 313 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 ARHGEF19Q8IW93 802 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 GLIS1Q8NBF1 620 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 ZNF397Q8NF99 534 aaPredicted RBP6.49□□□□□ -1.37
SMC4-217ENST00000485867 LMO3Q8TAP4 145 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 NT5C3BQ969T7 300 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 SLC35C1Q96A29 364 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 ELMO2Q96JJ3 720 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 EXOC2Q96KP1 924 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 C9orf72Q96LT7 481 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 OR2M4Q96R27 311 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 OR6C1Q96RD1 312 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms