RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.6□□□□□ -0.55
HPS4-214ENST00000485842 STEAP4Q687X5 459 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 DUS1LQ6P1R4 473 aaKnown RBP11.6□□□□□ -0.55
HPS4-214ENST00000485842 ZNF449Q6P9G9 518 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 ABRAXAS1Q6UWZ7 409 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 XKR5Q6UX68 686 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 WASH2PQ6VEQ5 465 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 LRRC6Q86X45 466 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 MARCH9Q86YJ5 346 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 LMNTD2Q8IXW0 634 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 AVL9Q8NBF6 648 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 LRRN4CLQ8ND94 238 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 SPDYE1Q8NFV5 336 aaPredicted RBP11.6□□□□□ -0.55
HPS4-214ENST00000485842 C12orf66Q96MD2 445 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 GFM1Q96RP9 751 aaKnown RBP11.6□□□□□ -0.55
HPS4-214ENST00000485842 TCF12Q99081 682 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 SLC38A3Q99624 504 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 SCNM1Q9BWG6 230 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 P2RY12Q9H244 342 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 PLAC1Q9HBJ0 212 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 SARS2Q9NP81 518 aaKnown RBP11.6□□□□□ -0.55
HPS4-214ENST00000485842 WASH6PQ9NQA3 447 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 FAM114A2Q9NRY5 505 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 KCNK4Q9NYG8 393 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 SLC17A6Q9P2U8 582 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 CPNE7Q9UBL6 633 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 FBXO5Q9UKT4 447 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 ACSL5Q9ULC5 683 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 ATXN7L1Q9ULK2 861 aaPredicted RBP11.6□□□□□ -0.55
HPS4-214ENST00000485842 VPS9D1Q9Y2B5 631 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 A0A1W2PQM1 296 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 LIN7AO14910 233 aaPredicted RBP11.59□□□□□ -0.55
HPS4-214ENST00000485842 EIF3HO15372 352 aaKnown RBP eCLIP11.59□□□□□ -0.558e-6■□□□□ 10.6
HPS4-214ENST00000485842 NIPSNAP2O75323 286 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 S1PR4O95977 384 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 MT-CO3P00414 261 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 GSTM1P09488 218 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 JUPP14923 745 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 PNLIPP16233 465 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 XRCC1P18887 633 aaPredicted RBP11.59□□□□□ -0.55
HPS4-214ENST00000485842 PDHA2P29803 388 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 DEKP35659 375 aaKnown RBP11.59□□□□□ -0.55
HPS4-214ENST00000485842 CARSP49589 748 aaKnown RBP11.59□□□□□ -0.55
HPS4-214ENST00000485842 GSTM4Q03013 218 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 TMED2Q15363 201 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 RPE65Q16518 533 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 MAP9Q49MG5 647 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 ZNF658BQ4V348 819 aaPredicted RBP11.59□□□□□ -0.55
HPS4-214ENST00000485842 GLE1Q53GS7 698 aaKnown RBP11.59□□□□□ -0.55
HPS4-214ENST00000485842 TRMT10BQ6PF06 316 aaKnown RBP11.59□□□□□ -0.55
HPS4-214ENST00000485842 ZNF438Q7Z4V0 828 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 GALNT15Q8N3T1 639 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 GABPB2Q8TAK5 448 aaPredicted RBP11.59□□□□□ -0.55
HPS4-214ENST00000485842 GSDMBQ8TAX9 411 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 PYROXD1Q8WU10 500 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 JPH3Q8WXH2 748 aaPredicted RBP11.59□□□□□ -0.55
HPS4-214ENST00000485842 IFT81Q8WYA0 676 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 TMEM159Q96B96 161 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 SH3KBP1Q96B97 665 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 FAM136AQ96C01 138 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 PANX3Q96QZ0 392 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 INSM2Q96T92 566 aaPredicted RBP11.59□□□□□ -0.55
HPS4-214ENST00000485842 OR52A5Q9H2C5 316 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 LRRN3Q9H3W5 708 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 POT1Q9NUX5 634 aa11.59□□□□□ -0.55
HPS4-214ENST00000485842 INTS10Q9NVR2 710 aaKnown RBP11.59□□□□□ -0.55
HPS4-214ENST00000485842 COL27A1Q8IZC6 1860 aaPredicted RBP11.58□□□□□ -0.56
HPS4-214ENST00000485842 LILRA5A6NI73 299 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 D6RAR5 112 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 E5RI56 91 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 IFRD1O00458 451 aaPredicted RBP11.58□□□□□ -0.56
HPS4-214ENST00000485842 ZW10O43264 779 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 B4GAT1O43505 415 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 ESR1P03372 595 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 APOA4P06727 396 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 RHOXF2BP0C7M4 288 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 MTHFD1P11586 935 aaKnown RBP11.58□□□□□ -0.56
HPS4-214ENST00000485842 PKMP14618 531 aaKnown RBP11.58□□□□□ -0.56
HPS4-214ENST00000485842 CCR7P32248 378 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 ABCG1P45844 678 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 GPR3P46089 330 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 HSPA14Q0VDF9 509 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 GPR18Q14330 331 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 KRT33BQ14525 404 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 NR1D2Q14995 579 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 TEX35Q5T0J7 233 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 NKAIN2Q5VXU1 208 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 CNSTQ6PJW8 725 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 RBM44Q6ZP01 1051 aaKnown RBP11.58□□□□□ -0.56
HPS4-214ENST00000485842 TMEM26Q6ZUK4 368 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 TMPRSS7Q7RTY8 843 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 PDZD3Q86UT5 571 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 TMPRSS12Q86WS5 348 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 PALM2Q8IXS6 379 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 C2CD4AQ8NCU7 369 aaPredicted RBP11.58□□□□□ -0.56
HPS4-214ENST00000485842 WDR48Q8TAF3 677 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 SEC14L1Q92503 715 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 AHCYL2Q96HN2 611 aaKnown RBP11.58□□□□□ -0.56
HPS4-214ENST00000485842 C9orf72Q96LT7 481 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 BIRC8Q96P09 236 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms