RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 MCUQ8NE86 351 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 FAM46DQ8NEK8 389 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 OR4K2Q8NGD2 314 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 ZNF398Q8TD17 642 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 BLOC1S5Q8TDH9 187 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 STYXQ8WUJ0 223 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 CCDC74AQ96AQ1 378 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 RNF31Q96EP0 1072 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 LIN37Q96GY3 246 aaPredicted RBP5.62□□□□□ -1.51
CUX1-208ENST00000485792 ZNF514Q96K75 400 aaPredicted RBP5.62□□□□□ -1.51
CUX1-208ENST00000485792 DNAJC1Q96KC8 554 aaKnown RBP5.62□□□□□ -1.51
CUX1-208ENST00000485792 PWWP2AQ96N64 755 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 OSBPL9Q96SU4 736 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 CCDC3Q9BQI4 270 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 KIFC1Q9BW19 673 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 SPATA16Q9BXB7 569 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 FSD1LQ9BXM9 530 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 RAB33BQ9H082 229 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 OR2AG1Q9H205 316 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 SYNPO2LQ9H987 977 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 UGT1A7Q9HAW7 530 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 UGT1A10Q9HAW8 530 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 UGT1A8Q9HAW9 530 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 MRM3Q9HC36 420 aaKnown RBP5.62□□□□□ -1.51
CUX1-208ENST00000485792 ASCL3Q9NQ33 180 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 ENAMQ9NRM1 1142 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 TREX1Q9NSU2 369 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 TRMT1Q9NXH9 659 aaKnown RBP5.62□□□□□ -1.51
CUX1-208ENST00000485792 IL1RAPL1Q9NZN1 696 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 SIRPGQ9P1W8 387 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 PAK5Q9P286 719 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 MARCH4Q9P2E8 410 aaPredicted RBP5.62□□□□□ -1.51
CUX1-208ENST00000485792 ZNF624Q9P2J8 865 aaPredicted RBP5.62□□□□□ -1.51
CUX1-208ENST00000485792 SLC17A6Q9P2U8 582 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 TBC1D29Q9UFV1 150 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 PCYOX1Q9UHG3 505 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 CLCA2Q9UQC9 943 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 KCNK6Q9Y257 313 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 PCDHGA8Q9Y5G5 932 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 RNF215Q9Y6U7 377 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 A0A087WV48 116 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 IGHV1OR21-1A0A087WYE8 117 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 KIR2DS5A0A0G2JLQ3 304 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 A0A0G2JNG1 304 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 GOLGA6CA6NDK9 693 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 GOLGA6BA6NDN3 693 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 B4DGG1 531 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 D6RAR5 112 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 KIR2DS3K7RE56 304 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 KMOO15229 486 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 STX7O15400 261 aaKnown RBP5.61□□□□□ -1.51
CUX1-208ENST00000485792 NRDCO43847 1150 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 CEP104O60308 925 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 CDK14O94921 469 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 PRAMEF1O95521 474 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 RPLP1P05386 114 aaKnown RBP5.61□□□□□ -1.51
CUX1-208ENST00000485792 GSTM1P09488 218 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 GOLGA6DP0CG33 693 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 ARAFP10398 606 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 MLNP12872 115 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 PCSK2P16519 638 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 WT1P19544 449 aaPredicted RBP5.61□□□□□ -1.51
CUX1-208ENST00000485792 ADRA1DP25100 572 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 COILP38432 576 aaPredicted RBP5.61□□□□□ -1.51
CUX1-208ENST00000485792 ETV5P41161 510 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 ACTR1BP42025 376 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 ARCN1P48444 511 aaKnown RBP5.61□□□□□ -1.51
CUX1-208ENST00000485792 NPY2RP49146 381 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 FNTAP49354 379 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 PRLHRP49683 370 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 ACTR1AP61163 376 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 SNRPNP63162 240 aaKnown RBP5.61□□□□□ -1.51
CUX1-208ENST00000485792 MRPS25P82663 173 aaKnown RBP5.61□□□□□ -1.51
CUX1-208ENST00000485792 DAB2P98082 770 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 GSTM4Q03013 218 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 COL9A2Q14055 689 aaPredicted RBP5.61□□□□□ -1.51
CUX1-208ENST00000485792 KIR2DS5Q14953 304 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 GPRC6AQ5T6X5 926 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 TSTD2Q5T7W7 516 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 CAPRIN2Q6IMN6 1127 aaKnown RBP5.61□□□□□ -1.51
CUX1-208ENST00000485792 LRRC8BQ6P9F7 803 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 WDR74Q6RFH5 385 aaPredicted RBP5.61□□□□□ -1.51
CUX1-208ENST00000485792 CRTC3Q6UUV7 619 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 PCSK4Q6UW60 755 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 LYPD4Q6UWN0 246 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 PACS1Q6VY07 963 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 RBM44Q6ZP01 1051 aaKnown RBP5.61□□□□□ -1.51
CUX1-208ENST00000485792 EFL1Q7Z2Z2 1120 aaKnown RBP5.61□□□□□ -1.51
CUX1-208ENST00000485792 ARHGAP22Q7Z5H3 698 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 CLEC14AQ86T13 490 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 LRRTM4Q86VH4 590 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 UNC5BQ8IZJ1 945 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 NXPE1Q8N323 547 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 LMNTD1Q8N9Z9 388 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 LRRN4CLQ8ND94 238 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 OR52K1Q8NGK4 314 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 SLC37A2Q8TED4 501 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 HEXDCQ8WVB3 486 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 SNRNP27Q8WVK2 155 aaKnown RBP5.61□□□□□ -1.51
CUX1-208ENST00000485792 ZFPM2Q8WW38 1151 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms