RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 RBP1P09455 135 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 ALPIP09923 528 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 PIRTP0C851 137 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 C6P13671 934 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 CTPS1P17812 591 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 SDHBP21912 280 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 HNRNPA2B1P22626 353 aaKnown RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 NFKBIAP25963 317 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 EPHA8P29322 1005 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 SLC26A3P40879 764 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 DPP6P42658 865 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 ABCG1P45844 678 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 RASSF2P50749 326 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 CCT8P50990 548 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 OVGP1Q12889 678 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 RALGDSQ12967 914 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 MSLNQ13421 630 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 IRF4Q15306 451 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 ZNF423Q2M1K9 1284 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 CGB2Q6NT52 195 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 RFLNAQ6ZTI6 216 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 RABEPKQ7Z6M1 372 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 CLEC14AQ86T13 490 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 SLCO6A1Q86UG4 719 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 C10orf107Q8IVU9 208 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 CHCHD4Q8N4Q1 142 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 EID2Q8N6I1 236 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 PLA2G15Q8NCC3 412 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 OR4K2Q8NGD2 314 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 RHBDD1Q8TEB9 315 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 C10orf82Q8WW14 230 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 CCDC126Q96EE4 140 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 THOC1Q96FV9 657 aaKnown RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 CDKN2AIPNLQ96HQ2 116 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 DNAJC1Q96KC8 554 aaKnown RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 CNTNAP3BQ96NU0 1288 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 ELF4Q99607 663 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 TUBB6Q9BUF5 446 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 SLC17A9Q9BYT1 436 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 CNTNAP3Q9BZ76 1288 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 GPR63Q9BZJ6 419 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 WWP1Q9H0M0 922 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 SUV39H2Q9H5I1 410 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 SUDS3Q9H7L9 328 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-216ENST00000484087 MAGEE1Q9HCI5 957 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 GPAMQ9HCL2 828 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 TXLNGQ9NUQ3 528 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 TOR4AQ9NXH8 423 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 KCNK4Q9NYG8 393 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 KLF15Q9UIH9 416 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 FKBPLQ9UIM3 349 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 DCTN4Q9UJW0 460 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 PCDHB9Q9Y5E1 797 aa6.85□□□□□ -1.31
BRCA1-216ENST00000484087 DMXL2Q8TDJ6 3036 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 CCDC162PA2VCL2 907 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 FAM149AA5PLN7 773 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 UPK3BL1B0FP48 263 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 TMEM114B3SHH9 223 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 UPK3BL2E5RIL1 263 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 F8W8V4 182 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 PRAMEF26H0Y7S4 382 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 MYO1CO00159 1063 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 TRAFD1O14545 582 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-216ENST00000484087 HNRNPCL1O60812 293 aaKnown RBP6.84□□□□□ -1.31
BRCA1-216ENST00000484087 NDUFS3O75489 264 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 SNUPNO95149 360 aaKnown RBP6.84□□□□□ -1.31
BRCA1-216ENST00000484087 PGLSO95336 258 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 HSPA4LO95757 839 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 SLC4A1P02730 911 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 PYGLP06737 847 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 LTA4HP09960 611 aaKnown RBP6.84□□□□□ -1.31
BRCA1-216ENST00000484087 FTH1P19P0C7X4 201 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 SLC35E2BP0CK96 405 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 GM2AP17900 193 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 CSRP1P21291 193 aaKnown RBP6.84□□□□□ -1.31
BRCA1-216ENST00000484087 LHCGRP22888 699 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 XPAP23025 273 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-216ENST00000484087 GABRB3P28472 473 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 MMP12P39900 470 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 SLC1A6P48664 564 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 TTPAP49638 278 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 LIG3P49916 1009 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 ZNF140P52738 457 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-216ENST00000484087 STC1P52823 247 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 TAS2R39P59534 338 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 ABCE1P61221 599 aaKnown RBP6.84□□□□□ -1.31
BRCA1-216ENST00000484087 RPS21P63220 83 aaKnown RBP6.84□□□□□ -1.31
BRCA1-216ENST00000484087 OCRLQ01968 901 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 ACTN3Q08043 901 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-216ENST00000484087 SFSWAPQ12872 951 aaKnown RBP6.84□□□□□ -1.31
BRCA1-216ENST00000484087 ITGA9Q13797 1035 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 PCLAFQ15004 111 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 TRIP6Q15654 476 aaKnown RBP6.84□□□□□ -1.31
BRCA1-216ENST00000484087 SPDYAQ5MJ70 313 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 HECTD2Q5U5R9 776 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 LIPMQ5VYY2 423 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 LRRC8EQ6NSJ5 796 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 CNSTQ6PJW8 725 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 ZYG11AQ6WRX3 759 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 Q6ZSR6 202 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms