RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 HSPA7P48741 367 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 ADAM15Q13444 863 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 E2F5Q15329 346 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 FRA10AC1Q70Z53 315 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 SCUBE1Q8IWY4 988 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 DDIASQ8IXT1 998 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 LILRA3Q8N6C8 439 aaPredicted RBP8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 PIP4K2CQ8TBX8 421 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 PANX3Q96QZ0 392 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 HBEGFQ99075 208 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 NOL11Q9H8H0 719 aaKnown RBP8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 SMOXQ9NWM0 555 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 CACNA2D2Q9NY47 1150 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 CCDC167Q9P0B6 97 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 PTBP2Q9UKA9 531 aaKnown RBP8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 ST14Q9Y5Y6 855 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 ATG2BQ96BY7 2078 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 UBDO15205 165 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 TBX10O75333 385 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 OR4F21O95013 312 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 SOD1P00441 154 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 ELFN1P0C7U0 828 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 THRAP10827 490 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 CYP2A6P11509 494 aaPredicted RBP8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 XPAP23025 273 aaPredicted RBP8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 PRDX6P30041 224 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 DPP6P42658 865 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 RGS4P49798 205 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 NUDT2P50583 147 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 CTSCP53634 463 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 NME5P56597 212 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 DCDC1P59894 354 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 CYLC2Q14093 348 aaPredicted RBP8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 PTK2BQ14289 1009 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 PDGFRLQ15198 375 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 DNAL1Q4LDG9 190 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 ZDHHC20Q5W0Z9 365 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 PGM2L1Q6PCE3 622 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 TXNDC11Q6PKC3 985 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 GK5Q6ZS86 529 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 CACUL1Q86Y37 369 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 MMAAQ8IVH4 418 aaKnown RBP8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 MYO1HQ8N1T3 1032 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 CDYL2Q8N8U2 506 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 PDPRQ8NCN5 879 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 OR2T11Q8NH01 316 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 RP9Q8TA86 221 aaKnown RBP8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 FOXJ1Q92949 421 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 RHBDF1Q96CC6 855 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 RCN3Q96D15 328 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 ASB2Q96Q27 587 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 TMEM79Q9BSE2 394 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 S1PR5Q9H228 398 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 OBP2AQ9NY56 170 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 NUDT4Q9NZJ9 180 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 POLG2Q9UHN1 485 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 OARD1Q9Y530 152 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 C9JVG2 144 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 ARNTLO00327 626 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 AREL1O15033 823 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 INPP4BO15327 924 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 KRT36O76013 467 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 KAT7O95251 611 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 LAMP2P13473 410 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 PSMC3P17980 439 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 MNAT1P51948 309 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 BOP1Q14137 746 aaKnown RBP8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 GBX1Q14549 363 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 ELAVL3Q14576 367 aaKnown RBP8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 ACOX1Q15067 660 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 PCBP2Q15366 365 aaKnown RBP eCLIP8.68□□□□□ -1.027e-7■■■■■ 29.1
CDC42SE1-204ENST00000483763 WASHC2DQ5SRD0 308 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 EGFLAMQ63HQ2 1017 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 PAOXQ6QHF9 649 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 GOLGA7Q7Z5G4 137 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 TRIM74Q86UV6 250 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 HPS6Q86YV9 775 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 FUNDC1Q8IVP5 155 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 DSELQ8IZU8 1212 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 RASGEF1AQ8N9B8 481 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 BTN2A2Q8WVV5 523 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 AP2M1Q96CW1 435 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 NPAS2Q99743 824 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 RTKNQ9BST9 563 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 FAM126AQ9BYI3 521 aaPredicted RBP8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 RNPEPL1Q9HAU8 725 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 THG1LQ9NWX6 298 aaKnown RBP8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 GULP1Q9UBP9 304 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 FAM8A1Q9UBU6 413 aa8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 CNOT6Q9ULM6 557 aaKnown RBP8.68□□□□□ -1.02
CDC42SE1-204ENST00000483763 MUC22E2RYF6 1773 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE1-204ENST00000483763 EDDM13A0A1B0GTR0 161 aa8.67□□□□□ -1.02
CDC42SE1-204ENST00000483763 FBP2O00757 339 aa8.67□□□□□ -1.02
CDC42SE1-204ENST00000483763 RAD51BO15315 384 aa8.67□□□□□ -1.02
CDC42SE1-204ENST00000483763 KATNA1O75449 491 aa8.67□□□□□ -1.02
CDC42SE1-204ENST00000483763 MLYCDO95822 493 aa8.67□□□□□ -1.02
CDC42SE1-204ENST00000483763 PRNPP04156 253 aa8.67□□□□□ -1.02
CDC42SE1-204ENST00000483763 OR56A5P0C7T3 313 aa8.67□□□□□ -1.02
CDC42SE1-204ENST00000483763 ADRB3P13945 408 aa8.67□□□□□ -1.02
CDC42SE1-204ENST00000483763 ITGB7P26010 798 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms