RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 UGT1A10Q9HAW8 530 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 UGT1A8Q9HAW9 530 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 NLE1Q9NVX2 485 aaPredicted RBP11.2□□□□□ -0.62
CCM2-213ENST00000480658 SCHIP1Q9P0W5 487 aaPredicted RBP11.2□□□□□ -0.62
CCM2-213ENST00000480658 FKBPLQ9UIM3 349 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 TMPRSS11EQ9UL52 423 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 RIMKLBQ9ULI2 386 aa11.2□□□□□ -0.62
CCM2-213ENST00000480658 IGLV3-16A0A075B6K0 115 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 LIN7AO14910 233 aaPredicted RBP11.19□□□□□ -0.62
CCM2-213ENST00000480658 LDB2O43679 373 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 C1QL1O75973 258 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 ZBTB11O95625 1053 aaPredicted RBP11.19□□□□□ -0.62
CCM2-213ENST00000480658 FTCDO95954 541 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 LIFP15018 202 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 STAT5AP42229 794 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 GFERP55789 205 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 HSD11B2P80365 405 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 XIAPP98170 497 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 NFE2L1Q14494 772 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 CLCA4Q14CN2 919 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 PCSK4Q6UW60 755 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 C6orf15Q6UXA7 325 aaPredicted RBP11.19□□□□□ -0.62
CCM2-213ENST00000480658 PACS1Q6VY07 963 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 ZNF662Q6ZS27 426 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 VASH2Q86V25 355 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 SIDT2Q8NBJ9 832 aaKnown RBP11.19□□□□□ -0.62
CCM2-213ENST00000480658 TRIM58Q8NG06 486 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 RSC1A1Q92681 617 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 SLC41A2Q96JW4 573 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 OR6C1Q96RD1 312 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 GORASP1Q9BQQ3 440 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 TMEM121Q9BTD3 319 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 MVB12BQ9H7P6 319 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 HRASLS2Q9NWW9 162 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 GEMIN8Q9NWZ8 242 aaKnown RBP11.19□□□□□ -0.62
CCM2-213ENST00000480658 OGFRQ9NZT2 677 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 PAK5Q9P286 719 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 RARRES3Q9UL19 164 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 WDR37Q9Y2I8 494 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 KCTD3Q9Y597 815 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 MRFAP1Q9Y605 127 aa11.19□□□□□ -0.62
CCM2-213ENST00000480658 TRBV5-4A0A0C4DH59 114 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 J3QKU1 62 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 AGRPO00253 132 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 PFDN6O15212 129 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 DDX3YO15523 660 aaKnown RBP11.18□□□□□ -0.62
CCM2-213ENST00000480658 BUD23O43709 281 aaKnown RBP11.18□□□□□ -0.62
CCM2-213ENST00000480658 SUN1O94901 812 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 DLGAP3O95886 979 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 RPN2P04844 631 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 OR56A5P0C7T3 313 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 MSL3P1P0C860 447 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 PBLDP30039 288 aaPredicted RBP11.18□□□□□ -0.62
CCM2-213ENST00000480658 TUBB4BP68371 445 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 TUBB3Q13509 450 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 TUBB2AQ13885 445 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 RPS6KA1Q15418 735 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 ZRANB3Q5FWF4 1079 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 AFTPHQ6ULP2 937 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 PPP1R21Q6ZMI0 780 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 DET1Q7L5Y6 550 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 CFAP206Q8IYR0 622 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 SGSM3Q96HU1 749 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 RANBP9Q96S59 729 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 APOL2Q9BQE5 337 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 DESI2Q9BSY9 194 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 TUBB2BQ9BVA1 445 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 SLC12A9Q9BXP2 914 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 GPR87Q9BY21 358 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 SPRY4Q9C004 299 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 WWP1Q9H0M0 922 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 LATS2Q9NRM7 1088 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 TRIM10Q9UDY6 481 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 POLG2Q9UHN1 485 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 SLC24A2Q9UI40 661 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 ZNF148Q9UQR1 794 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 PCDHGA6Q9Y5G7 932 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 CAPN6Q9Y6Q1 641 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 UNC13CQ8NB66 2214 aa11.18□□□□□ -0.62
CCM2-213ENST00000480658 MROH6A6NGR9 719 aa11.17□□□□□ -0.62
CCM2-213ENST00000480658 LIASO43766 372 aa11.17□□□□□ -0.62
CCM2-213ENST00000480658 CPNE3O75131 537 aaKnown RBP11.17□□□□□ -0.62
CCM2-213ENST00000480658 PRB1P04280 392 aa11.17□□□□□ -0.62
CCM2-213ENST00000480658 PLA2G2AP14555 144 aa11.17□□□□□ -0.62
CCM2-213ENST00000480658 TCN2P20062 427 aa11.17□□□□□ -0.62
CCM2-213ENST00000480658 PSMA3P25788 255 aa11.17□□□□□ -0.62
CCM2-213ENST00000480658 MSNP26038 577 aaKnown RBP11.17□□□□□ -0.62
CCM2-213ENST00000480658 ARSDP51689 593 aa11.17□□□□□ -0.62
CCM2-213ENST00000480658 CDC20Q12834 499 aa11.17□□□□□ -0.62
CCM2-213ENST00000480658 MSLNQ13421 630 aaPredicted RBP11.17□□□□□ -0.62
CCM2-213ENST00000480658 LY6DQ14210 128 aa11.17□□□□□ -0.62
CCM2-213ENST00000480658 POU6F1Q14863 301 aa11.17□□□□□ -0.62
CCM2-213ENST00000480658 SYTL3Q4VX76 610 aa11.17□□□□□ -0.62
CCM2-213ENST00000480658 CAPRIN2Q6IMN6 1127 aaKnown RBP11.17□□□□□ -0.62
CCM2-213ENST00000480658 DENND5AQ6IQ26 1287 aa11.17□□□□□ -0.62
CCM2-213ENST00000480658 DRICH1Q6PGQ1 229 aaPredicted RBP11.17□□□□□ -0.62
CCM2-213ENST00000480658 FAM92BQ6ZTR7 304 aa11.17□□□□□ -0.62
CCM2-213ENST00000480658 TAS2R42Q7RTR8 314 aa11.17□□□□□ -0.62
CCM2-213ENST00000480658 HOOK3Q86VS8 718 aa11.17□□□□□ -0.62
CCM2-213ENST00000480658 SERPINA9Q86WD7 417 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms