RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 FAM174AQ8TBP5 190 aa17.25■□□□□ 0.35
UPF3A-206ENST00000480362 OR1E3Q8WZA6 343 aa17.25■□□□□ 0.35
UPF3A-206ENST00000480362 TMEM159Q96B96 161 aa17.25■□□□□ 0.35
UPF3A-206ENST00000480362 COG4Q9H9E3 785 aa17.25■□□□□ 0.35
UPF3A-206ENST00000480362 CYP4F12Q9HCS2 524 aa17.25■□□□□ 0.35
UPF3A-206ENST00000480362 FGF22Q9HCT0 170 aa17.25■□□□□ 0.35
UPF3A-206ENST00000480362 TM7SF3Q9NS93 570 aa17.25■□□□□ 0.35
UPF3A-206ENST00000480362 FBXO4Q9UKT5 387 aa17.25■□□□□ 0.35
UPF3A-206ENST00000480362 SUFUQ9UMX1 484 aa17.25■□□□□ 0.35
UPF3A-206ENST00000480362 PRSS38A1L453 326 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 G3V2L1 256 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 TNFRSF10CO14798 259 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 BPGMP07738 259 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 THEGLP0DJG4 465 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 MPC1LP0DKB6 136 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 AVPR2P30518 371 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 GNPDA1P46926 289 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 PREPP48147 710 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 PTK2BQ14289 1009 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 NFE2L1Q14494 772 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 LPCAT2Q7L5N7 544 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 CHST15Q7LFX5 561 aaPredicted RBP17.24■□□□□ 0.35
UPF3A-206ENST00000480362 RD3Q7Z3Z2 195 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 GALNT13Q8IUC8 556 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 OXR1Q8N573 874 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 RHEBL1Q8TAI7 183 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 STAG3L4Q8TBR4 150 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 RDH11Q8TC12 318 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 HM13Q8TCT9 377 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 CKAP2Q8WWK9 683 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 GLMNQ92990 594 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 KLHDC7BQ96G42 594 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 MECRQ9BV79 373 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 MIR1-1HGQ9H1L0 117 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 COPG2Q9UBF2 871 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 MID2Q9UJV3 735 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 GPSM3Q9Y4H4 160 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 TRIOO75962 3097 aa17.24■□□□□ 0.35
UPF3A-206ENST00000480362 CACNA1IQ9P0X4 2223 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 BIRC5O15392 142 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 GPR37L1O60883 481 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 MYL2P10916 166 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 CD38P28907 300 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 PDHA2P29803 388 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 ALDH3A1P30838 453 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 SRP54P61011 504 aaKnown RBP17.23■□□□□ 0.35
UPF3A-206ENST00000480362 RACK1P63244 317 aaKnown RBP17.23■□□□□ 0.35
UPF3A-206ENST00000480362 SRSF5Q13243 272 aaKnown RBP17.23■□□□□ 0.35
UPF3A-206ENST00000480362 PCLAFQ15004 111 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 XKR5Q6UX68 686 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 ZYG11AQ6WRX3 759 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 FAM83HQ6ZRV2 1179 aaPredicted RBP17.23■□□□□ 0.35
UPF3A-206ENST00000480362 NEK10Q6ZWH5 1172 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 ARMCX6Q7L4S7 300 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 NUDCD3Q8IVD9 361 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 RGL4Q8IZJ4 473 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 SLC22A18ASQ8N1D0 253 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 MFSD2AQ8NA29 543 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 SKA2Q8WVK7 121 aaPredicted RBP17.23■□□□□ 0.35
UPF3A-206ENST00000480362 GAB3Q8WWW8 586 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 DNASE2BQ8WZ79 361 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 TSACCQ96A04 125 aaPredicted RBP17.23■□□□□ 0.35
UPF3A-206ENST00000480362 ATOH8Q96SQ7 321 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 CAPS2Q9BXY5 557 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 CARS2Q9HA77 564 aaKnown RBP17.23■□□□□ 0.35
UPF3A-206ENST00000480362 GPR27Q9NS67 375 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 KLQ9UEF7 1012 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 RNF112Q9ULX5 631 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 DNAJC16Q9Y2G8 782 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 PLEKHM1Q9Y4G2 1056 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 CEP192Q8TEP8 1941 aa17.23■□□□□ 0.35
UPF3A-206ENST00000480362 A0A1W2PR77 199 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 CCDC189A1A4V9 331 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 KLHL33A6NCF5 533 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 SCAMP1O15126 338 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 DLX3O60479 287 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 KCNJ13O60928 360 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 KERAO60938 352 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 WNT1P04628 370 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 NEFHP12036 1026 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 ACP5P13686 325 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 TAC1P20366 129 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 KCNA4P22459 653 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 PLOD1Q02809 727 aaPredicted RBP17.22■□□□□ 0.35
UPF3A-206ENST00000480362 ABRQ12979 859 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 ALG11Q2TAA5 492 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 WDR45BQ5MNZ6 344 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 C11orf74Q86VG3 221 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 GPSM1Q86YR5 675 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 C10orf107Q8IVU9 208 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 SLC22A15Q8IZD6 547 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 EXT2Q93063 718 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 PDXPQ96GD0 296 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 OR2M4Q96R27 311 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 TIMM29Q9BSF4 260 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 TM9SF3Q9HD45 589 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 KLC4Q9NSK0 619 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 ADAMTS6Q9UKP5 1117 aa17.22■□□□□ 0.35
UPF3A-206ENST00000480362 PNMA8BQ9ULN7 279 aaPredicted RBP17.22■□□□□ 0.35
UPF3A-206ENST00000480362 SPTY2D1-AS1A0A0U1RR47 76 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms