RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ELOVL7A1L3X0 281 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 ZNF840PA6NDX5 716 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 H0Y858 1186 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 H3BN98 237 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 SAP18O00422 153 aaKnown RBP10.86□□□□□ -0.67
COL27A1-204ENST00000477421 SERPINB10P48595 397 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 ADARP55265 1226 aaKnown RBP10.86□□□□□ -0.67
COL27A1-204ENST00000477421 ALDH6A1Q02252 535 aaKnown RBP10.86□□□□□ -0.67
COL27A1-204ENST00000477421 TLR1Q15399 786 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 TTC23Q5W5X9 447 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 RAVER1Q8IY67 606 aaKnown RBP10.86□□□□□ -0.67
COL27A1-204ENST00000477421 CFAP206Q8IYR0 622 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 SUSD6Q92537 303 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 NT5C3BQ969T7 300 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 ROPN1LQ96C74 230 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 RTP3Q9BQQ7 232 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 CSNK1G1Q9HCP0 422 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 SMPD3Q9NY59 655 aaPredicted RBP10.86□□□□□ -0.67
COL27A1-204ENST00000477421 NUDT4Q9NZJ9 180 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 C3orf18Q9UK00 162 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 SLC22A14Q9Y267 594 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 SH3GLB1Q9Y371 365 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 THSD7AQ9UPZ6 1657 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 LOC100506127A0A0U1RQW1 187 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 H3BSA7 217 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 DIRAS1O95057 198 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 GALK1P51570 392 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 SPANXN4Q5MJ08 99 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 ACBD5Q5T8D3 534 aaPredicted RBP10.85□□□□□ -0.67
COL27A1-204ENST00000477421 TLDC1Q6P9B6 456 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 CHST9Q7L1S5 443 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 KREMEN2Q8NCW0 462 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 SLC47A1Q96FL8 570 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 AMBNQ9NP70 447 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 ARFGEF1Q9Y6D6 1849 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 ANKDD1BA6NHY2 528 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 TRBC1P01850 177 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 CYP11A1P05108 521 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 CSTF3Q12996 717 aaKnown RBP10.85□□□□□ -0.67
COL27A1-204ENST00000477421 DCTN2Q13561 401 aaKnown RBP10.85□□□□□ -0.67
COL27A1-204ENST00000477421 FAM219BQ5XKK7 198 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 MRPL10Q7Z7H8 261 aaKnown RBP10.85□□□□□ -0.67
COL27A1-204ENST00000477421 OR9Q1Q8NGQ5 310 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 SLC22A17Q8WUG5 538 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 BOCQ9BWV1 1114 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 SGK2Q9HBY8 427 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 GMPR2Q9P2T1 348 aaKnown RBP10.85□□□□□ -0.67
COL27A1-204ENST00000477421 RAPGEFL1Q9UHV5 662 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 SLCO3A1Q9UIG8 710 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 MAGEL2Q9UJ55 1249 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 RNF11Q9Y3C5 154 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 KDELR3O43731 214 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 TLL1O43897 1013 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 XYLBO75191 536 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 PAPSS2O95340 614 aaPredicted RBP10.85□□□□□ -0.67
COL27A1-204ENST00000477421 GBAP04062 536 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 PRKACGP22612 351 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 MAGEA11P43364 429 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 SLC16A1P53985 500 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 MCCD1P59942 119 aaPredicted RBP10.85□□□□□ -0.67
COL27A1-204ENST00000477421 KDELC1Q6UW63 502 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL27A1-204ENST00000477421 SYVN1Q86TM6 617 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 STX19Q8N4C7 294 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 OR13J1Q8NGT2 312 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 C3orf30Q96M34 536 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 ZNF599Q96NL3 588 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 ZDHHC4Q9NPG8 344 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 CREBZFQ9NS37 354 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 DNAJC11Q9NVH1 559 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 ADPRHL2Q9NX46 363 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 TMCC3Q9ULS5 477 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 GMPPBQ9Y5P6 360 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 UTRNP46939 3433 aa10.85□□□□□ -0.67
COL27A1-204ENST00000477421 H3BM21 787 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 TRMUO75648 421 aaKnown RBP10.84□□□□□ -0.67
COL27A1-204ENST00000477421 EPOP01588 193 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 SLC10A3P09131 477 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 ILF2Q12905 390 aaKnown RBP10.84□□□□□ -0.67
COL27A1-204ENST00000477421 HERC3Q15034 1050 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 C6orf136Q5SQH8 315 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 PERM1Q5SV97 790 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 KCTD11Q693B1 232 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 ARHGAP22Q7Z5H3 698 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 BBS7Q8IWZ6 715 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 SLAIN1Q8ND83 568 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 COL26A1Q96A83 441 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 DTNBP1Q96EV8 351 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 TCF25Q9BQ70 676 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 FEM1AQ9BSK4 669 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 INTS7Q9NVH2 962 aaKnown RBP10.84□□□□□ -0.67
COL27A1-204ENST00000477421 RAB23Q9ULC3 237 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 VPS4AQ9UN37 437 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 DGKBQ9Y6T7 804 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 ANKRD31Q8N7Z5 1873 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 K7EPI3 171 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 KPNA5O15131 536 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 MUSKO15146 869 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 S100A5P33763 92 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 NSG1P42857 185 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms