RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 ZDHHC3Q9NYG2 299 aa10.55□□□□□ -0.72
SEC13-214ENST00000476597 CFAP20Q9Y6A4 193 aaKnown RBP10.55□□□□□ -0.72
SEC13-214ENST00000476597 CAPN6Q9Y6Q1 641 aa10.55□□□□□ -0.72
SEC13-214ENST00000476597 IGLV3-16A0A075B6K0 115 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 IGHV5-51A0A0C4DH38 117 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 OR5K3A6NET4 321 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 GOLGA6L3A6NEY3 463 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 ZNF891A8MT65 544 aaPredicted RBP10.54□□□□□ -0.72
SEC13-214ENST00000476597 CFAP99D6REC4 459 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 CCL22O00626 93 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 NKX2-8O15522 239 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 SPAG6O75602 509 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 POLBP06746 335 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 FAM87AP0C7U9 286 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 SFTPCP11686 197 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 ZNF28P17035 718 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 STAT5AP42229 794 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 CDKN1CP49918 316 aaPredicted RBP10.54□□□□□ -0.72
SEC13-214ENST00000476597 P3H1Q32P28 736 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.54□□□□□ -0.72
SEC13-214ENST00000476597 SDK2Q58EX2 2172 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 BORAQ6PGQ7 559 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 C6orf15Q6UXA7 325 aaPredicted RBP10.54□□□□□ -0.72
SEC13-214ENST00000476597 SERPINA9Q86WD7 417 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 ESX1Q8N693 406 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 STYXQ8WUJ0 223 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 KIAA1143Q96AT1 154 aaPredicted RBP10.54□□□□□ -0.72
SEC13-214ENST00000476597 C12orf66Q96MD2 445 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 CATSPER2Q96P56 530 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 CCM2Q9BSQ5 444 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 ULBP3Q9BZM4 244 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 KIR3DX1Q9H7L2 352 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 HRASLS2Q9NWW9 162 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 GEMIN8Q9NWZ8 242 aaKnown RBP10.54□□□□□ -0.72
SEC13-214ENST00000476597 IL17BQ9UHF5 180 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 SLC24A2Q9UI40 661 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 COLEC10Q9Y6Z7 277 aa10.54□□□□□ -0.72
SEC13-214ENST00000476597 MROH6A6NGR9 719 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 J3QKU1 62 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 PRSS56P0CW18 603 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 FOLR1P15328 257 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 ACRV1P26436 265 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 NFATC3Q12968 1075 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 GSE1Q14687 1217 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 POU6F1Q14863 301 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 PLCL1Q15111 1095 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 OASLQ15646 514 aaKnown RBP10.53□□□□□ -0.72
SEC13-214ENST00000476597 ZNF658BQ4V348 819 aaPredicted RBP10.53□□□□□ -0.72
SEC13-214ENST00000476597 CRTC2Q53ET0 693 aaPredicted RBP10.53□□□□□ -0.72
SEC13-214ENST00000476597 ZRANB3Q5FWF4 1079 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 DUS1LQ6P1R4 473 aaKnown RBP10.53□□□□□ -0.72
SEC13-214ENST00000476597 MICALCLQ6ZW33 695 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 TAS2R42Q7RTR8 314 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 LINC00523Q86TU6 105 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 BPHLQ86WA6 291 aaPredicted RBP10.53□□□□□ -0.72
SEC13-214ENST00000476597 PPP1R3BQ86XI6 285 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 KMT5CQ86Y97 462 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 RASGRP3Q8IV61 690 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 PIANPQ8IYJ0 282 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 SIDT2Q8NBJ9 832 aaKnown RBP10.53□□□□□ -0.72
SEC13-214ENST00000476597 HM13Q8TCT9 377 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 ELMO2Q96JJ3 720 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 RMDN2Q96LZ7 410 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 FCRL4Q96PJ5 515 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 CD180Q99467 661 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 MAP3K3Q99759 626 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 FRMD8P1Q9BZ68 369 aaPredicted RBP10.53□□□□□ -0.72
SEC13-214ENST00000476597 PDE7BQ9NP56 450 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 FAM8A1Q9UBU6 413 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 HEBP2Q9Y5Z4 205 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 RPS6KL1Q9Y6S9 549 aa10.53□□□□□ -0.72
SEC13-214ENST00000476597 ZFC3H1O60293 1989 aaKnown RBP10.52□□□□□ -0.72
SEC13-214ENST00000476597 UBR5O95071 2799 aaPredicted RBP10.52□□□□□ -0.73
SEC13-214ENST00000476597 UBA6A0AVT1 1052 aaPredicted RBP10.52□□□□□ -0.73
SEC13-214ENST00000476597 OR6C74A6NCV1 312 aa10.52□□□□□ -0.73
SEC13-214ENST00000476597 TLCD2A6NGC4 264 aa10.52□□□□□ -0.73
SEC13-214ENST00000476597 ERI2A8K979 691 aaKnown RBP10.52□□□□□ -0.73
SEC13-214ENST00000476597 TERTO14746 1132 aaKnown RBP10.52□□□□□ -0.73
SEC13-214ENST00000476597 LIASO43766 372 aa10.52□□□□□ -0.73
SEC13-214ENST00000476597 KRT86O43790 486 aa10.52□□□□□ -0.73
SEC13-214ENST00000476597 KIAA0754O94854 1291 aa10.52□□□□□ -0.73
SEC13-214ENST00000476597 SUN1O94901 812 aa10.52□□□□□ -0.73
SEC13-214ENST00000476597 SLC35G4P0C7Q5 338 aa10.52□□□□□ -0.73
SEC13-214ENST00000476597 F8A1P23610 371 aa10.52□□□□□ -0.73
SEC13-214ENST00000476597 NDUFS1P28331 727 aa10.52□□□□□ -0.73
SEC13-214ENST00000476597 CD151P48509 253 aa10.52□□□□□ -0.73
SEC13-214ENST00000476597 MC1RQ01726 317 aa10.52□□□□□ -0.73
SEC13-214ENST00000476597 ACY1Q03154 408 aa10.52□□□□□ -0.73
SEC13-214ENST00000476597 CACNG1Q06432 222 aa10.52□□□□□ -0.73
SEC13-214ENST00000476597 DBN1Q16643 649 aa10.52□□□□□ -0.73
SEC13-214ENST00000476597 SKIDA1Q1XH10 827 aa10.52□□□□□ -0.73
SEC13-214ENST00000476597 DNTTIP2Q5QJE6 756 aaKnown RBP10.52□□□□□ -0.73
SEC13-214ENST00000476597 MEI1Q5TIA1 1274 aa10.52□□□□□ -0.73
SEC13-214ENST00000476597 CYB5D1Q6P9G0 228 aa10.52□□□□□ -0.73
SEC13-214ENST00000476597 CERS6Q6ZMG9 384 aa10.52□□□□□ -0.73
SEC13-214ENST00000476597 OOSP2Q86WS3 158 aa10.52□□□□□ -0.73
SEC13-214ENST00000476597 SLC13A5Q86YT5 568 aaPredicted RBP10.52□□□□□ -0.73
SEC13-214ENST00000476597 D2HGDHQ8N465 521 aa10.52□□□□□ -0.73
SEC13-214ENST00000476597 TAB3Q8N5C8 712 aaPredicted RBP10.52□□□□□ -0.73
SEC13-214ENST00000476597 CLDN19Q8N6F1 224 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms