RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 MTAPQ13126 283 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 BOP1Q14137 746 aaKnown RBP12.03□□□□□ -0.48
MRPL55-227ENST00000475832 GAS6Q14393 721 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 WSCD2Q2TBF2 565 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 TMEM259Q4ZIN3 620 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 ZC3H14Q6PJT7 736 aaKnown RBP12.03□□□□□ -0.48
MRPL55-227ENST00000475832 NEK10Q6ZWH5 1172 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 SPATA21Q7Z572 469 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 TRIM69Q86WT6 500 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 HEATR4Q86WZ0 1026 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 TRAPPC5Q8IUR0 188 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 WDR75Q8IWA0 830 aaKnown RBP12.03□□□□□ -0.48
MRPL55-227ENST00000475832 FBXO39Q8N4B4 442 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 CCNYL1Q8N7R7 359 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 RASGEF1AQ8N9B8 481 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 CCDC197Q8NCU1 140 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 EXT2Q93063 718 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 HIST1H2AHQ96KK5 128 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 FOPNLQ96NB1 174 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 HIST1H2AJQ99878 128 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 ELAC2Q9BQ52 826 aaKnown RBP12.03□□□□□ -0.48
MRPL55-227ENST00000475832 SIKE1Q9BRV8 207 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 H2AFJQ9BTM1 129 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 PRMT8Q9NR22 394 aaPredicted RBP12.03□□□□□ -0.48
MRPL55-227ENST00000475832 NUDT4Q9NZJ9 180 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 CD274Q9NZQ7 290 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 GALPQ9UBC7 116 aa12.03□□□□□ -0.48
MRPL55-227ENST00000475832 CNOT6Q9ULM6 557 aaKnown RBP12.03□□□□□ -0.48
MRPL55-227ENST00000475832 ZFR2Q9UPR6 939 aaKnown RBP12.03□□□□□ -0.48
MRPL55-227ENST00000475832 FAM208BQ5VWN6 2430 aa12.02□□□□□ -0.48
MRPL55-227ENST00000475832 NPEPPSL1A6NEC2 478 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 A8MT66 165 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 TARM1B6A8C7 271 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 K7ESM1 405 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 FPGTO14772 594 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 LIN7AO14910 233 aaPredicted RBP12.02□□□□□ -0.49
MRPL55-227ENST00000475832 SLC16A5O15375 505 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 NUAK1O60285 661 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 DLX3O60479 287 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 NPHS1O60500 1241 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 APBB3O95704 486 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 SEMA4FO95754 770 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 C8GP07360 202 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 ENO2P09104 434 aaPredicted RBP12.02□□□□□ -0.49
MRPL55-227ENST00000475832 VCLP18206 1134 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 CYP2A7P20853 494 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 AOAHP28039 575 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 AKT2P31751 481 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 CCR7P32248 378 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 HK2P52789 917 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 NAGLUP54802 743 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 CDK3Q00526 305 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 SP140Q13342 867 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 INPP5AQ14642 412 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 IRF4Q15306 451 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 TSNQ15631 228 aaKnown RBP12.02□□□□□ -0.49
MRPL55-227ENST00000475832 ZNF528Q3MIS6 628 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 ACSBG2Q5FVE4 666 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 ANO7Q6IWH7 933 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 ZCCHC23Q6ZST2 131 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 ADGRG6Q86SQ4 1221 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 SPATS2Q86XZ4 545 aaKnown RBP12.02□□□□□ -0.49
MRPL55-227ENST00000475832 SPEM1Q8N4L4 309 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 TP53I13Q8NBR0 393 aaPredicted RBP12.02□□□□□ -0.49
MRPL55-227ENST00000475832 GIMAP7Q8NHV1 300 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 LKAAEAR1Q8TD35 194 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 NELL1Q92832 810 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 GLMNQ92990 594 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 PTERQ96BW5 349 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 COX14Q96I36 57 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 CNDP1Q96KN2 507 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 LENG8Q96PV6 779 aaPredicted RBP12.02□□□□□ -0.49
MRPL55-227ENST00000475832 SLC30A3Q99726 388 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 TRMOQ9BU70 441 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 TEX101Q9BY14 249 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 RMI1Q9H9A7 625 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 USP36Q9P275 1121 aaKnown RBP12.02□□□□□ -0.49
MRPL55-227ENST00000475832 KLHL14Q9P2G3 628 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 FBXO4Q9UKT5 387 aa12.02□□□□□ -0.49
MRPL55-227ENST00000475832 TNPO3Q9Y5L0 923 aaKnown RBP12.02□□□□□ -0.49
MRPL55-227ENST00000475832 DNMT3AQ9Y6K1 912 aaPredicted RBP12.02□□□□□ -0.49
MRPL55-227ENST00000475832 ZNF106Q9H2Y7 1883 aaKnown RBP12.02□□□□□ -0.49
MRPL55-227ENST00000475832 ANKRD11Q6UB99 2663 aaPredicted RBP12.01□□□□□ -0.49
MRPL55-227ENST00000475832 C17orf113A0A1B0GUU1 675 aa12.01□□□□□ -0.49
MRPL55-227ENST00000475832 CDC7O00311 574 aa12.01□□□□□ -0.49
MRPL55-227ENST00000475832 TOR1BO14657 336 aa12.01□□□□□ -0.49
MRPL55-227ENST00000475832 KMOO15229 486 aa12.01□□□□□ -0.49
MRPL55-227ENST00000475832 SLC31A1O15431 190 aa12.01□□□□□ -0.49
MRPL55-227ENST00000475832 SNNO75324 88 aaPredicted RBP12.01□□□□□ -0.49
MRPL55-227ENST00000475832 TSPAN12O95859 305 aa12.01□□□□□ -0.49
MRPL55-227ENST00000475832 SOD1P00441 154 aa12.01□□□□□ -0.49
MRPL55-227ENST00000475832 IGLV3-19P01714 112 aa12.01□□□□□ -0.49
MRPL55-227ENST00000475832 MYCLP1P12525 358 aaPredicted RBP12.01□□□□□ -0.49
MRPL55-227ENST00000475832 TDGF1P13385 188 aa12.01□□□□□ -0.49
MRPL55-227ENST00000475832 IMPDH1P20839 514 aa12.01□□□□□ -0.49
MRPL55-227ENST00000475832 HNRNPA2B1P22626 353 aaKnown RBP12.01□□□□□ -0.49
MRPL55-227ENST00000475832 MAP4P27816 1152 aaKnown RBP12.01□□□□□ -0.49
MRPL55-227ENST00000475832 HTR1BP28222 390 aa12.01□□□□□ -0.49
MRPL55-227ENST00000475832 MAT2AP31153 395 aaKnown RBP12.01□□□□□ -0.49
MRPL55-227ENST00000475832 TRIM23P36406 574 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms