RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 METRNLQ641Q3 311 aa12.27□□□□□ -0.45
SKA3-206ENST00000475251 FAM198BQ6UWH4 519 aa12.27□□□□□ -0.45
SKA3-206ENST00000475251 IGFL3Q6UXB1 125 aa12.27□□□□□ -0.45
SKA3-206ENST00000475251 CISD2Q8N5K1 135 aaKnown RBP12.27□□□□□ -0.45
SKA3-206ENST00000475251 ZBTB2Q8N680 514 aa12.27□□□□□ -0.45
SKA3-206ENST00000475251 PQLC3Q8N755 202 aa12.27□□□□□ -0.45
SKA3-206ENST00000475251 DDHD1Q8NEL9 900 aa12.27□□□□□ -0.45
SKA3-206ENST00000475251 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.27□□□□□ -0.45
SKA3-206ENST00000475251 LRRN4Q8WUT4 740 aa12.27□□□□□ -0.45
SKA3-206ENST00000475251 C19orf60Q96EN9 201 aa12.27□□□□□ -0.45
SKA3-206ENST00000475251 C12orf66Q96MD2 445 aa12.27□□□□□ -0.45
SKA3-206ENST00000475251 AGAP3Q96P47 875 aa12.27□□□□□ -0.45
SKA3-206ENST00000475251 TLR10Q9BXR5 811 aa12.27□□□□□ -0.45
SKA3-206ENST00000475251 HSD3B7Q9H2F3 369 aa12.27□□□□□ -0.45
SKA3-206ENST00000475251 KIR3DX1Q9H7L2 352 aa12.27□□□□□ -0.45
SKA3-206ENST00000475251 BPIFA1Q9NP55 256 aa12.27□□□□□ -0.45
SKA3-206ENST00000475251 HACD3Q9P035 362 aa12.27□□□□□ -0.45
SKA3-206ENST00000475251 SLC24A2Q9UI40 661 aa12.27□□□□□ -0.45
SKA3-206ENST00000475251 SERTAD3Q9UJW9 196 aa12.27□□□□□ -0.45
SKA3-206ENST00000475251 HEY1Q9Y5J3 304 aa12.27□□□□□ -0.45
SKA3-206ENST00000475251 COPG1Q9Y678 874 aaKnown RBP12.27□□□□□ -0.45
SKA3-206ENST00000475251 MED13Q9UHV7 2174 aa12.27□□□□□ -0.45
SKA3-206ENST00000475251 HIVEP3Q5T1R4 2406 aa12.27□□□□□ -0.45
SKA3-206ENST00000475251 OR2AG2A6NM03 316 aa12.26□□□□□ -0.45
SKA3-206ENST00000475251 TMEM150CB9EJG8 249 aa12.26□□□□□ -0.45
SKA3-206ENST00000475251 PEX12O00623 359 aa12.26□□□□□ -0.45
SKA3-206ENST00000475251 HNRNPRO43390 633 aaKnown RBP12.26□□□□□ -0.45
SKA3-206ENST00000475251 SLC35G4P0C7Q5 338 aa12.26□□□□□ -0.45
SKA3-206ENST00000475251 PREPP48147 710 aa12.26□□□□□ -0.45
SKA3-206ENST00000475251 KPNA2P52292 529 aaKnown RBP12.26□□□□□ -0.45
SKA3-206ENST00000475251 RAPSNQ13702 412 aa12.26□□□□□ -0.45
SKA3-206ENST00000475251 KRT33BQ14525 404 aa12.26□□□□□ -0.45
SKA3-206ENST00000475251 MYBPC3Q14896 1274 aa12.26□□□□□ -0.45
SKA3-206ENST00000475251 ATP13A4Q4VNC1 1196 aa12.26□□□□□ -0.45
SKA3-206ENST00000475251 TMEM220Q6QAJ8 160 aa12.26□□□□□ -0.45
SKA3-206ENST00000475251 ZADH2Q8N4Q0 377 aa12.26□□□□□ -0.45
SKA3-206ENST00000475251 RASGEF1AQ8N9B8 481 aa12.26□□□□□ -0.45
SKA3-206ENST00000475251 TADA1Q96BN2 335 aa12.26□□□□□ -0.45
SKA3-206ENST00000475251 RNF157Q96PX1 679 aa12.26□□□□□ -0.45
SKA3-206ENST00000475251 RUBCNLQ9H714 662 aa12.26□□□□□ -0.45
SKA3-206ENST00000475251 IL26Q9NPH9 171 aa12.26□□□□□ -0.45
SKA3-206ENST00000475251 PCMTD2Q9NV79 361 aa12.26□□□□□ -0.45
SKA3-206ENST00000475251 POMT2Q9UKY4 750 aa12.26□□□□□ -0.45
SKA3-206ENST00000475251 TMPRSS11EQ9UL52 423 aa12.26□□□□□ -0.45
SKA3-206ENST00000475251 PKP3Q9Y446 797 aa12.26□□□□□ -0.45
SKA3-206ENST00000475251 HEBP2Q9Y5Z4 205 aa12.26□□□□□ -0.45
SKA3-206ENST00000475251 CFAP20Q9Y6A4 193 aaKnown RBP12.26□□□□□ -0.45
SKA3-206ENST00000475251 A0A0A6YYK5 440 aaPredicted RBP12.25□□□□□ -0.45
SKA3-206ENST00000475251 GLYATL1P3A0A0U1RQE8 302 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 MGAT4DA6NG13 374 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 ZNF487B1APH4 448 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 E7EQ34 232 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 AURKAO14965 403 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 PROSCO94903 275 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 CAPN1P07384 714 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 ZFXP17010 805 aaPredicted RBP12.25□□□□□ -0.45
SKA3-206ENST00000475251 MSH3P20585 1137 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 PBLDP30039 288 aaPredicted RBP12.25□□□□□ -0.45
SKA3-206ENST00000475251 AKT1P31749 480 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 OTX2P32243 289 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 CTSCP53634 463 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 RIPPLY3P57055 190 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 ABRQ12979 859 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 SSPNQ14714 243 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 FIGNQ5HY92 759 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 LCN10Q6JVE6 187 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 FAM83HQ6ZRV2 1179 aaPredicted RBP12.25□□□□□ -0.45
SKA3-206ENST00000475251 MRGPREQ86SM8 312 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 VSIG1Q86XK7 387 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 SRRM1Q8IYB3 904 aaKnown RBP12.25□□□□□ -0.45
SKA3-206ENST00000475251 GPR135Q8IZ08 494 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 GALNT16Q8N428 558 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 ST6GALNAC3Q8NDV1 305 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 UBE2Q2Q8WVN8 375 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 SYN2Q92777 582 aaPredicted RBP12.25□□□□□ -0.45
SKA3-206ENST00000475251 INSM2Q96T92 566 aaPredicted RBP12.25□□□□□ -0.45
SKA3-206ENST00000475251 MAK16Q9BXY0 300 aaKnown RBP12.25□□□□□ -0.45
SKA3-206ENST00000475251 CEP41Q9BYV8 373 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 WWP1Q9H0M0 922 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 LMBRD1Q9NUN5 540 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 SMOXQ9NWM0 555 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 UVRAGQ9P2Y5 699 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 GPN3Q9UHW5 284 aaPredicted RBP12.25□□□□□ -0.45
SKA3-206ENST00000475251 SPO11Q9Y5K1 396 aa12.25□□□□□ -0.45
SKA3-206ENST00000475251 GSAPA4D1B5 854 aa12.24□□□□□ -0.45
SKA3-206ENST00000475251 C2orf72A6NCS6 295 aa12.24□□□□□ -0.45
SKA3-206ENST00000475251 SLC9B1P1A6NJY1 282 aa12.24□□□□□ -0.45
SKA3-206ENST00000475251 SMTNL1A8MU46 457 aa12.24□□□□□ -0.45
SKA3-206ENST00000475251 F5H423 210 aaPredicted RBP12.24□□□□□ -0.45
SKA3-206ENST00000475251 APOL1O14791 398 aa12.24□□□□□ -0.45
SKA3-206ENST00000475251 PMPCBO75439 489 aa12.24□□□□□ -0.45
SKA3-206ENST00000475251 MT-CYBP00156 380 aaPredicted RBP12.24□□□□□ -0.45
SKA3-206ENST00000475251 EPOP01588 193 aa12.24□□□□□ -0.45
SKA3-206ENST00000475251 SERPING1P05155 500 aa12.24□□□□□ -0.45
SKA3-206ENST00000475251 POLR2CP19387 275 aaPredicted RBP12.24□□□□□ -0.45
SKA3-206ENST00000475251 KDELR1P24390 212 aa12.24□□□□□ -0.45
SKA3-206ENST00000475251 GLRBP48167 497 aa12.24□□□□□ -0.45
SKA3-206ENST00000475251 NFKBIBQ15653 356 aa12.24□□□□□ -0.45
SKA3-206ENST00000475251 PTCHD3Q3KNS1 767 aa12.24□□□□□ -0.45
SKA3-206ENST00000475251 TEX44Q53QW1 395 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms