RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 LIPEQ05469 1076 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 S100A14Q9HCY8 104 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.84□□□□□ -0.67
VAPB-204ENST00000475243 SLC38A8A6NNN8 435 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 BBIP1A8MTZ0 92 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 FADS2P1A8MWK0 482 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 MATN3O15232 486 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 ARL2P36404 184 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 CAP1Q01518 475 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 PTGES3Q15185 160 aaKnown RBP10.84□□□□□ -0.67
VAPB-204ENST00000475243 SATL1Q86VE3 508 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 TFAP2BQ92481 460 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 RBM4BQ9BQ04 359 aaKnown RBP10.84□□□□□ -0.67
VAPB-204ENST00000475243 TRMOQ9BU70 441 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 RBM4Q9BWF3 364 aaKnown RBP10.84□□□□□ -0.67
VAPB-204ENST00000475243 FKBPLQ9UIM3 349 aa10.84□□□□□ -0.67
VAPB-204ENST00000475243 METTL18O95568 372 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 TBX18O95935 607 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 CYB5D2Q8WUJ1 264 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 S100ZQ8WXG8 99 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 TGDSO95455 350 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 SP2Q02086 613 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 SLC8B1Q6J4K2 584 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 TMC8Q8IU68 726 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 UNC5BQ8IZJ1 945 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 WBP11Q9Y2W2 641 aaKnown RBP10.83□□□□□ -0.68
VAPB-204ENST00000475243 PTPN2P17706 415 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 C12orf66Q96MD2 445 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 CDK15Q96Q40 435 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 ACBD6Q9BR61 282 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 YIPF4Q9BSR8 244 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 SRMSQ9H3Y6 488 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 PLEKHA1Q9HB21 404 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 ARHGEF4Q9NR80 690 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 COPS7AQ9UBW8 275 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 CDH7Q9ULB5 785 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 ROBO3Q96MS0 1386 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 C8AP07357 584 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 F7P08709 466 aaPredicted RBP10.83□□□□□ -0.68
VAPB-204ENST00000475243 IL7RP16871 459 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 TIE1P35590 1138 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 ACTR3P61158 418 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 CLNKQ7Z7G1 428 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 GSDMCQ9BYG8 508 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 SLC25A51Q9H1U9 297 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 POLR3BQ9NW08 1133 aaPredicted RBP10.83□□□□□ -0.68
VAPB-204ENST00000475243 GNEQ9Y223 722 aaKnown RBP10.83□□□□□ -0.68
VAPB-204ENST00000475243 MFHAS1Q9Y4C4 1052 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 LGR5O75473 907 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 SLC35G6P0C7Q6 338 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 CD247P20963 164 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 ALDH4A1P30038 563 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 ARSIQ5FYB1 569 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 PAOXQ6QHF9 649 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 PHF12Q96QT6 1004 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 IL12RB2Q99665 862 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 ING3Q9NXR8 418 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 RAPGEFL1Q9UHV5 662 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 MED31Q9Y3C7 131 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 A0A1W2PRU2 124 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 ZNF879B4DU55 563 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 FKBP1BP68106 108 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 PRR5P85299 388 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 PCBP2Q15366 365 aaKnown RBP eCLIP10.83□□□□□ -0.681e-6■□□□□ 10.7
VAPB-204ENST00000475243 DLK2Q6UY11 383 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 ANKRD23Q86SG2 305 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 NPAS4Q8IUM7 802 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 AUTS2Q8WXX7 1259 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 CLCC1Q96S66 551 aa10.83□□□□□ -0.68
VAPB-204ENST00000475243 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.83□□□□□ -0.68
VAPB-204ENST00000475243 RIIAD1A6NNX1 92 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 PIP5K1BO14986 540 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 RAB25P57735 213 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 GMFBP60983 142 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 RASSF6Q6ZTQ3 369 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 FZD10Q9ULW2 581 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 TRAFD1O14545 582 aaPredicted RBP10.82□□□□□ -0.68
VAPB-204ENST00000475243 NOBOXO60393 691 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 SHOX2O60902 331 aaPredicted RBP10.82□□□□□ -0.68
VAPB-204ENST00000475243 STATHP02808 62 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 ZNF8P17098 575 aaPredicted RBP10.82□□□□□ -0.68
VAPB-204ENST00000475243 C1QTNF8P60827 252 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 PPP2R2DQ66LE6 453 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 FATE1Q969F0 183 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 LENG8Q96PV6 779 aaPredicted RBP10.82□□□□□ -0.68
VAPB-204ENST00000475243 FBXW11Q9UKB1 542 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 COL3A1P02461 1466 aaPredicted RBP10.82□□□□□ -0.68
VAPB-204ENST00000475243 A0A1W2PRG6 482 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 YJEFN3A6XGL0 299 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 RGS10O43665 173 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 CDH12P55289 794 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 RFTN2Q52LD8 501 aaPredicted RBP10.82□□□□□ -0.68
VAPB-204ENST00000475243 CERS6Q6ZMG9 384 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 IRF2BP1Q8IU81 584 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 RASGEF1CQ8N431 466 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 OR4C6Q8NH72 309 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 EFHD2Q96C19 240 aaPredicted RBP10.82□□□□□ -0.68
VAPB-204ENST00000475243 HEPHQ9BQS7 1158 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 ELAC1Q9H777 363 aaKnown RBP10.82□□□□□ -0.68
VAPB-204ENST00000475243 TBC1D17Q9HA65 648 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms