RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 CASP1P29466 404 aa7.77□□□□□ -1.17
USP54-211ENST00000474929 HTR7P34969 479 aa7.77□□□□□ -1.17
USP54-211ENST00000474929 KIR2DL3P43628 341 aa7.77□□□□□ -1.17
USP54-211ENST00000474929 CARSP49589 748 aaKnown RBP7.77□□□□□ -1.17
USP54-211ENST00000474929 SCNN1BP51168 640 aa7.77□□□□□ -1.17
USP54-211ENST00000474929 AP1B1Q10567 949 aa7.77□□□□□ -1.17
USP54-211ENST00000474929 STK38Q15208 465 aa7.77□□□□□ -1.17
USP54-211ENST00000474929 NKAIN1Q4KMZ8 207 aa7.77□□□□□ -1.17
USP54-211ENST00000474929 FAM102AQ5T9C2 384 aaPredicted RBP7.77□□□□□ -1.17
USP54-211ENST00000474929 ATG9BQ674R7 924 aa7.77□□□□□ -1.17
USP54-211ENST00000474929 BHLHB9Q6PI77 547 aa7.77□□□□□ -1.17
USP54-211ENST00000474929 ARSKQ6UWY0 536 aa7.77□□□□□ -1.17
USP54-211ENST00000474929 RIPOR1Q6ZS17 1223 aa7.77□□□□□ -1.17
USP54-211ENST00000474929 ACAD11Q709F0 780 aa7.77□□□□□ -1.17
USP54-211ENST00000474929 BNIPLQ7Z465 357 aa7.77□□□□□ -1.17
USP54-211ENST00000474929 BBS5Q8N3I7 341 aa7.77□□□□□ -1.17
USP54-211ENST00000474929 TSEN2Q8NCE0 465 aaKnown RBP7.77□□□□□ -1.17
USP54-211ENST00000474929 SCAMP4Q969E2 229 aa7.77□□□□□ -1.17
USP54-211ENST00000474929 HDAC10Q969S8 669 aa7.77□□□□□ -1.17
USP54-211ENST00000474929 TAS2R14Q9NYV8 317 aa7.77□□□□□ -1.17
USP54-211ENST00000474929 ARMCX3Q9UH62 379 aaPredicted RBP7.77□□□□□ -1.17
USP54-211ENST00000474929 CD84Q9UIB8 345 aa7.77□□□□□ -1.17
USP54-211ENST00000474929 RNF6Q9Y252 685 aa7.77□□□□□ -1.17
USP54-211ENST00000474929 HS3ST3B1Q9Y662 390 aa7.77□□□□□ -1.17
USP54-211ENST00000474929 ANKRD12Q6UB98 2062 aa7.77□□□□□ -1.17
USP54-211ENST00000474929 ADAM10O14672 748 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 SMAD7O15105 426 aaKnown RBP7.76□□□□□ -1.17
USP54-211ENST00000474929 KLHL18O94889 574 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 BMP10O95393 424 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 ERBB2P04626 1255 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 TPOP07202 933 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 ACPPP15309 386 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 ZNF7P17097 686 aaPredicted RBP7.76□□□□□ -1.17
USP54-211ENST00000474929 RGRP47804 291 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 FMO5P49326 533 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 DMTNQ08495 405 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 SLC5A12Q1EHB4 618 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 FLYWCH1Q4VC44 716 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 ZCWPW2Q504Y3 356 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 ZNF569Q5MCW4 686 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 ARMC12Q5T9G4 340 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 ABHD17BQ5VST6 288 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 LRRC66Q68CR7 880 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 TLDC1Q6P9B6 456 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 KIRREL2Q6UWL6 708 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 KRBA2Q6ZNG9 492 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 CEP128Q6ZU80 1094 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 TMEM178AQ8NBL3 297 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 NETO2Q8NC67 525 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 FAM222BQ8WU58 562 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 DLG3Q92796 817 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 SLC35C1Q96A29 364 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 NTAN1Q96AB6 310 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 PSKH2Q96QS6 385 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 RIOK2Q9BVS4 552 aaKnown RBP7.76□□□□□ -1.17
USP54-211ENST00000474929 TP63Q9H3D4 680 aaPredicted RBP7.76□□□□□ -1.17
USP54-211ENST00000474929 NOL6Q9H6R4 1146 aaKnown RBP7.76□□□□□ -1.17
USP54-211ENST00000474929 SP110Q9HB58 689 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 PTGFRNQ9P2B2 879 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 POMT2Q9UKY4 750 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 LUC7L2Q9Y383 392 aaKnown RBP7.76□□□□□ -1.17
USP54-211ENST00000474929 PPIL1Q9Y3C6 166 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 PCYT1BQ9Y5K3 369 aaPredicted RBP7.76□□□□□ -1.17
USP54-211ENST00000474929 ADGRG1Q9Y653 693 aa7.76□□□□□ -1.17
USP54-211ENST00000474929 MEGF8Q7Z7M0 2845 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 RGSL1A5PLK6 1076 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 ASPDHA6ND91 283 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 USP27XA6NNY8 438 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 FAM47E-STBD1D6RA91 191 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 NPIPA5E9PKD4 350 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 CHUKO15111 745 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 ZSCAN9O15535 394 aaPredicted RBP7.75□□□□□ -1.17
USP54-211ENST00000474929 ASNA1O43681 348 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 ACTN4O43707 911 aaKnown RBP7.75□□□□□ -1.17
USP54-211ENST00000474929 ALOX12BO75342 701 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 OR2B3O76000 313 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 WFS1O76024 890 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 LCA5LO95447 670 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 CALCAP01258 141 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 SERPINA7P05543 415 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 CBSLP0DN79 551 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 RPL10P27635 214 aaKnown RBP7.75□□□□□ -1.17
USP54-211ENST00000474929 NDUFS1P28331 727 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 CBSP35520 551 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 RAB28P51157 221 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 PTPN20Q4JDL3 420 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 ZNF766Q5HY98 468 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 FKBP15Q5T1M5 1219 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 HENMT1Q5T8I9 393 aaKnown RBP7.75□□□□□ -1.17
USP54-211ENST00000474929 LCE2DQ5TA82 110 aaPredicted RBP7.75□□□□□ -1.17
USP54-211ENST00000474929 PDPK2PQ6A1A2 396 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 HIBCHQ6NVY1 386 aaPredicted RBP7.75□□□□□ -1.17
USP54-211ENST00000474929 TTI2Q6NXR4 508 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 OR11G2Q8NGC1 345 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 KAT5Q92993 513 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 Q96MF0 132 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 ZNF599Q96NL3 588 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 PIP5K1AQ99755 562 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 TSG101Q99816 390 aa7.75□□□□□ -1.17
USP54-211ENST00000474929 SLC6A16Q9GZN6 736 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms