RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 SCHIP1Q9P0W5 487 aaPredicted RBP6.87□□□□□ -1.31
LIMD1-204ENST00000474665 TAAR2Q9P1P5 351 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 GALPQ9UBC7 116 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 TBC1D29Q9UFV1 150 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 ZNHIT2Q9UHR6 403 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 MOSPD1Q9UJG1 213 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 FBXO5Q9UKT4 447 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 PCDHGB2Q9Y5G2 931 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 CSNK1G3Q9Y6M4 447 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 HEATR5BQ9P2D3 2071 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 PRAMEF33A0A0G2JMD5 474 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 NDC80O14777 642 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 YKT6O15498 198 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 FFAR2O15552 330 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 SIGLEC6O43699 453 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 NOBOXO60393 691 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 HAUS5O94927 633 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 BRAFP15056 766 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 MSH3P20585 1137 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 OGNP20774 298 aaKnown RBP6.86□□□□□ -1.31
LIMD1-204ENST00000474665 RPS3P23396 243 aaKnown RBP eCLIP6.86□□□□□ -1.31
LIMD1-204ENST00000474665 TNFRSF8P28908 595 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 AKT1P31749 480 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 BLKP51451 505 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 CLCNKAP51800 687 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 PGGT1BP53609 377 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 VSNL1P62760 191 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 TLE3Q04726 772 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 DMPKQ09013 629 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 UBAP2LQ14157 1087 aaKnown RBP6.86□□□□□ -1.31
LIMD1-204ENST00000474665 NFE2L1Q14494 772 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 HLTFQ14527 1009 aaKnown RBP eCLIP6.86□□□□□ -1.31
LIMD1-204ENST00000474665 EFTUD2Q15029 972 aaKnown RBP eCLIP6.86□□□□□ -1.311e-6■■□□□ 11.7
LIMD1-204ENST00000474665 PROX2Q3B8N5 592 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 PLA2G4EQ3MJ16 856 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 CNSTQ6PJW8 725 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 OGFOD3Q6PK18 319 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 SLC30A9Q6PML9 568 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 NAPRTQ6XQN6 538 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 CERS6Q6ZMG9 384 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 ZNF574Q6ZN55 896 aaPredicted RBP6.86□□□□□ -1.31
LIMD1-204ENST00000474665 CAPN12Q6ZSI9 719 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 C3orf62Q6ZUJ4 267 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 CYS1Q717R9 158 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 CHST15Q7LFX5 561 aaPredicted RBP6.86□□□□□ -1.31
LIMD1-204ENST00000474665 GLRX5Q86SX6 157 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 LRRTM4Q86VH4 590 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 C17orf82Q86X59 251 aaPredicted RBP6.86□□□□□ -1.31
LIMD1-204ENST00000474665 TRAPPC5Q8IUR0 188 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 CCNJLQ8IV13 435 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 IFT20Q8IY31 132 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 SLC35F3Q8IY50 421 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 NAGSQ8N159 534 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 EID2Q8N6I1 236 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 OR4C6Q8NH72 309 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 GSDMBQ8TAX9 411 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 SETD7Q8WTS6 366 aaKnown RBP6.86□□□□□ -1.31
LIMD1-204ENST00000474665 PYROXD1Q8WU10 500 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 LINC00615Q96LM1 132 aaPredicted RBP6.86□□□□□ -1.31
LIMD1-204ENST00000474665 TCF12Q99081 682 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 FMO2Q99518 471 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 TIMM29Q9BSF4 260 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 FAM129AQ9BZQ8 928 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 PRDM8Q9NQV8 689 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 FBXO6Q9NRD1 293 aaPredicted RBP6.86□□□□□ -1.31
LIMD1-204ENST00000474665 IARS2Q9NSE4 1012 aaKnown RBP6.86□□□□□ -1.31
LIMD1-204ENST00000474665 KLC4Q9NSK0 619 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 SPASTQ9UBP0 616 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 PCOLCE2Q9UKZ9 415 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 GPR34Q9UPC5 381 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 KCNK6Q9Y257 313 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 WDR37Q9Y2I8 494 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 CRYL1Q9Y2S2 319 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 MGAQ8IWI9 3026 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 RELNP78509 3460 aa6.86□□□□□ -1.31
LIMD1-204ENST00000474665 ATMQ13315 3056 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 HMX2A2RU54 273 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 MGAT4DA6NG13 374 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 FAM159BA6NKW6 160 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 H3BM21 787 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 PRMT5O14744 637 aaPredicted RBP6.85□□□□□ -1.31
LIMD1-204ENST00000474665 TPP1O14773 563 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 KMOO15229 486 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 NIPSNAP2O75323 286 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 DKK1O94907 266 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 AP2A2O94973 939 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 AHSGP02765 367 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 CTSEP14091 401 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 PAMP19021 973 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 AOAHP28039 575 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 PDHA2P29803 388 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 FMO4P31512 558 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 CCR7P32248 378 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 ACTR1BP42025 376 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 NSG1P42857 185 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 LEPRP48357 1165 aaKnown RBP6.85□□□□□ -1.31
LIMD1-204ENST00000474665 TTPAP49638 278 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 ADARP55265 1226 aaKnown RBP6.85□□□□□ -1.31
LIMD1-204ENST00000474665 EIF3BP55884 814 aaKnown RBP6.85□□□□□ -1.31
LIMD1-204ENST00000474665 ACTR1AP61163 376 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms