RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 GJB7Q6PEY0 223 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 PARM1Q6UWI2 310 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 CYB5R4Q7L1T6 521 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 CCDC91Q7Z6B0 441 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 PEG10Q86TG7 708 aaKnown RBP2.38□□□□□ -2.03
CALD1-216ENST00000473714 PRPF39Q86UA1 669 aaKnown RBP2.38□□□□□ -2.03
CALD1-216ENST00000473714 CCDC25Q86WR0 208 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 DZIP1Q86YF9 867 aaKnown RBP2.38□□□□□ -2.03
CALD1-216ENST00000473714 TDRPQ86YL5 185 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 RHPN2Q8IUC4 686 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 ARHGEF19Q8IW93 802 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 RP1L1Q8IWN7 2480 aaPredicted RBP2.38□□□□□ -2.03
CALD1-216ENST00000473714 THNSL1Q8IYQ7 743 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 ADGRF3Q8IZF5 1079 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 SLC34A3Q8N130 599 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 ZCCHC9Q8N567 271 aaKnown RBP2.38□□□□□ -2.03
CALD1-216ENST00000473714 FAM47BQ8NA70 645 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 COLGALT1Q8NBJ5 622 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 CCDC168Q8NDH2 2452 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 RASSF8Q8NHQ8 419 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 GSDMBQ8TAX9 411 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 SSC4DQ8WTU2 575 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 NSMCE1Q8WV22 266 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 ASB10Q8WXI3 467 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 FGF14Q92915 247 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 RFKQ969G6 155 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 ZNF845Q96IR2 970 aaPredicted RBP2.38□□□□□ -2.03
CALD1-216ENST00000473714 CAMK1GQ96NX5 476 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 NPAS1Q99742 590 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 ADAM2Q99965 735 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 CPNE5Q9HCH3 593 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 PLSCR4Q9NRQ2 329 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 C20orf141Q9NUB4 165 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 SYBUQ9NX95 663 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 ZDHHC7Q9NXF8 308 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 KIAA1456Q9P272 454 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 UPB1Q9UBR1 384 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 SEC63Q9UGP8 760 aaKnown RBP2.38□□□□□ -2.03
CALD1-216ENST00000473714 ANAPC5Q9UJX4 755 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 TLK1Q9UKI8 766 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 NENFQ9UMX5 172 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 A4GNTQ9UNA3 340 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 R3HDM2Q9Y2K5 976 aaKnown RBP2.38□□□□□ -2.03
CALD1-216ENST00000473714 PKP3Q9Y446 797 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 ZNF711Q9Y462 761 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 RAD50Q92878 1312 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 KDM3AQ9Y4C1 1321 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 LRRK1Q38SD2 2015 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 BIRC6Q9NR09 4857 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 hCG_1809904A0A1W2PP81 198 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 A0A1W2PPE2 198 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 A0A1W2PR64 198 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 FRMD3A2A2Y4 597 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 FAM149AA5PLN7 773 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 A6NL46 340 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 MARCH11A6NNE9 402 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 LINC00473A8K010 186 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 BTBD18B2RXH4 712 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 AKR1B15C9JRZ8 316 aaPredicted RBP2.37□□□□□ -2.03
CALD1-216ENST00000473714 PLK4O00444 970 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 PRYO14603 147 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 PSMA7O14818 248 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 ATP2A1O14983 1001 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 TGFB1I1O43294 461 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 ATP2C2O75185 946 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 RBMXL2O75526 392 aaKnown RBP2.37□□□□□ -2.03
CALD1-216ENST00000473714 ERAL1O75616 437 aaKnown RBP2.37□□□□□ -2.03
CALD1-216ENST00000473714 CXCL14O95715 111 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 ADAP00813 363 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 SERPINC1P01008 464 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 TUBB4AP04350 444 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 HNRNPCP07910 306 aaKnown RBP eCLIP2.37□□□□□ -2.03
CALD1-216ENST00000473714 CYP2D6P10635 497 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 TFPIP10646 304 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 IGFBP2P18065 325 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 YWHAQP27348 245 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 TACR3P29371 465 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 RFC1P35251 1148 aaPredicted RBP2.37□□□□□ -2.03
CALD1-216ENST00000473714 MSH2P43246 934 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 MTNR1AP48039 350 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 STAT2P52630 851 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 SEMG2Q02383 582 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 SRSF4Q08170 494 aaKnown RBP2.37□□□□□ -2.03
CALD1-216ENST00000473714 CCDC173Q0VFZ6 552 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 CSTF3Q12996 717 aaKnown RBP2.37□□□□□ -2.03
CALD1-216ENST00000473714 AIMP2Q13155 320 aaKnown RBP2.37□□□□□ -2.03
CALD1-216ENST00000473714 GIT2Q14161 759 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 DRAP1Q14919 205 aaPredicted RBP2.37□□□□□ -2.03
CALD1-216ENST00000473714 KARSQ15046 597 aaKnown RBP2.37□□□□□ -2.03
CALD1-216ENST00000473714 CCDC57Q2TAC2 916 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 FBXO43Q4G163 708 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 ALG10Q5BKT4 473 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 IGSF11Q5DX21 431 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 RNASE12Q5GAN4 147 aaKnown RBP2.37□□□□□ -2.03
CALD1-216ENST00000473714 ALG10BQ5I7T1 473 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 SPOUT1Q5T280 376 aaKnown RBP2.37□□□□□ -2.03
CALD1-216ENST00000473714 ZNF425Q6IV72 752 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 HMBOX1Q6NT76 420 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 CEP85Q6P2H3 762 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms