RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 MPOP05164 745 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 ENO3P13929 434 aaPredicted RBP16.54■□□□□ 0.24
CCM2-205ENST00000472223 FDXRP22570 491 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 CCR7P32248 378 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 MAPK9P45984 424 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 CDKN2DP55273 166 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 BNC1Q01954 994 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 BIRC2Q13490 618 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 BMPR2Q13873 1038 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 NFE2L1Q14494 772 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 KRT33BQ14525 404 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 TCEA2Q15560 299 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 METRNLQ641Q3 311 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 LVRNQ6Q4G3 990 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 C11orf96Q7Z7L8 435 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 TBC1D1Q86TI0 1168 aaPredicted RBP16.54■□□□□ 0.24
CCM2-205ENST00000472223 NKAPQ8N5F7 415 aaKnown RBP16.54■□□□□ 0.24
CCM2-205ENST00000472223 MINDY1Q8N5J2 469 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 SIDT2Q8NBJ9 832 aaKnown RBP16.54■□□□□ 0.24
CCM2-205ENST00000472223 ZNF548Q8NEK5 533 aaPredicted RBP16.54■□□□□ 0.24
CCM2-205ENST00000472223 FAM46DQ8NEK8 389 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 GLMNQ92990 594 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 MCMBPQ9BTE3 642 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 LRRC61Q9BV99 259 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 TCEAL2Q9H3H9 227 aaPredicted RBP16.54■□□□□ 0.24
CCM2-205ENST00000472223 DPEP2Q9H4A9 486 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 SMOC1Q9H4F8 434 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 VIPAS39Q9H9C1 493 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 COG4Q9H9E3 785 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 FSCN3Q9NQT6 498 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 SLC23A2Q9UGH3 650 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 CACNA1EQ15878 2313 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 ADAMTS9Q9P2N4 1935 aa16.54■□□□□ 0.24
CCM2-205ENST00000472223 LRP4O75096 1905 aa16.53■□□□□ 0.24
CCM2-205ENST00000472223 TMEM131Q92545 1883 aa16.53■□□□□ 0.24
CCM2-205ENST00000472223 A0A087X1B8 175 aa16.53■□□□□ 0.24
CCM2-205ENST00000472223 OR5K4A6NMS3 321 aa16.53■□□□□ 0.24
CCM2-205ENST00000472223 LMO7DNF2Z398 122 aa16.53■□□□□ 0.24
CCM2-205ENST00000472223 EIF3FO00303 357 aaPredicted RBP16.53■□□□□ 0.24
CCM2-205ENST00000472223 DYNC1I1O14576 645 aa16.53■□□□□ 0.24
CCM2-205ENST00000472223 SDC3O75056 442 aa16.53■□□□□ 0.24
CCM2-205ENST00000472223 AK4P27144 223 aaPredicted RBP16.53■□□□□ 0.24
CCM2-205ENST00000472223 CLCN7P51798 805 aa16.53■□□□□ 0.24
CCM2-205ENST00000472223 TAS2R39P59534 338 aa16.53■□□□□ 0.24
CCM2-205ENST00000472223 AASDHQ4L235 1098 aaPredicted RBP16.53■□□□□ 0.24
CCM2-205ENST00000472223 TTC23LQ6PF05 361 aa16.53■□□□□ 0.24
CCM2-205ENST00000472223 MYO1HQ8N1T3 1032 aa16.53■□□□□ 0.24
CCM2-205ENST00000472223 DUSP23Q9BVJ7 150 aa16.53■□□□□ 0.24
CCM2-205ENST00000472223 STN1Q9H668 368 aaKnown RBP16.53■□□□□ 0.24
CCM2-205ENST00000472223 CAB39LQ9H9S4 337 aa16.53■□□□□ 0.24
CCM2-205ENST00000472223 TAAR2Q9P1P5 351 aa16.53■□□□□ 0.24
CCM2-205ENST00000472223 PNMA8BQ9ULN7 279 aaPredicted RBP16.53■□□□□ 0.24
CCM2-205ENST00000472223 ACOT9Q9Y305 439 aa16.53■□□□□ 0.24
CCM2-205ENST00000472223 PLEKHM1Q9Y4G2 1056 aa16.53■□□□□ 0.24
CCM2-205ENST00000472223 TPP1O14773 563 aa16.52■□□□□ 0.24
CCM2-205ENST00000472223 OPA1O60313 960 aa16.52■□□□□ 0.24
CCM2-205ENST00000472223 RPN2P04844 631 aa16.52■□□□□ 0.24
CCM2-205ENST00000472223 GCAP28676 217 aa16.52■□□□□ 0.24
CCM2-205ENST00000472223 EPHA8P29322 1005 aaPredicted RBP16.52■□□□□ 0.24
CCM2-205ENST00000472223 IL9RQ01113 521 aa16.52■□□□□ 0.24
CCM2-205ENST00000472223 ZNF844Q08AG5 666 aa16.52■□□□□ 0.24
CCM2-205ENST00000472223 BNIP3Q12983 259 aa16.52■□□□□ 0.24
CCM2-205ENST00000472223 SEPT7Q16181 437 aaKnown RBP16.52■□□□□ 0.24
CCM2-205ENST00000472223 KCTD16Q68DU8 428 aa16.52■□□□□ 0.24
CCM2-205ENST00000472223 TCEAL6Q6IPX3 200 aa16.52■□□□□ 0.24
CCM2-205ENST00000472223 PAQR3Q6TCH7 311 aa16.52■□□□□ 0.24
CCM2-205ENST00000472223 AVL9Q8NBF6 648 aa16.52■□□□□ 0.24
CCM2-205ENST00000472223 LKAAEAR1Q8TD35 194 aa16.52■□□□□ 0.24
CCM2-205ENST00000472223 TCEAL3Q969E4 200 aa16.52■□□□□ 0.24
CCM2-205ENST00000472223 OLFM1Q99784 485 aa16.52■□□□□ 0.24
CCM2-205ENST00000472223 VPS11Q9H270 941 aa16.52■□□□□ 0.24
CCM2-205ENST00000472223 SNX15Q9NRS6 342 aa16.52■□□□□ 0.24
CCM2-205ENST00000472223 EVA1BQ9NVM1 165 aa16.52■□□□□ 0.24
CCM2-205ENST00000472223 PCYT1BQ9Y5K3 369 aaPredicted RBP16.52■□□□□ 0.24
CCM2-205ENST00000472223 HEBP2Q9Y5Z4 205 aa16.52■□□□□ 0.24
CCM2-205ENST00000472223 ZFC3H1O60293 1989 aaKnown RBP16.51■□□□□ 0.23
CCM2-205ENST00000472223 KNL1Q8NG31 2342 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 A0A096LPK6 155 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 SLC5A10A0PJK1 596 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 LNP1A1A4G5 178 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 YY2O15391 372 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 KDM1AO60341 852 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 GPC4O75487 556 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 SLCO2B1O94956 709 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 ZNF883P0CG24 379 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 RPL10P27635 214 aaKnown RBP16.51■□□□□ 0.23
CCM2-205ENST00000472223 SLC26A3P40879 764 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 PREPP48147 710 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 KPNA2P52292 529 aaKnown RBP16.51■□□□□ 0.23
CCM2-205ENST00000472223 NHLH1Q02575 133 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 SF3A2Q15428 464 aaKnown RBP16.51■□□□□ 0.23
CCM2-205ENST00000472223 UAP1L1Q3KQV9 507 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 AGAP9Q5VTM2 703 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 KLC3Q6P597 504 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 WASH2PQ6VEQ5 465 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 NAPRTQ6XQN6 538 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 TIFABQ6ZNK6 161 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 NEK10Q6ZWH5 1172 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 PIM3Q86V86 326 aa16.51■□□□□ 0.23
CCM2-205ENST00000472223 TRIM48Q8IWZ4 208 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms