RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 PCDHGB6Q9Y5F9 930 aa6.69□□□□□ -1.34
HDAC1-204ENST00000471488 KLF2Q9Y5W3 355 aaPredicted RBP6.69□□□□□ -1.34
HDAC1-204ENST00000471488 PCSK5Q92824 1860 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 EIF3CLB5ME19 914 aaKnown RBP6.68□□□□□ -1.34
HDAC1-204ENST00000471488 EPHB6O15197 1021 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 VEGFDO43915 354 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 GADD45BO75293 160 aaPredicted RBP6.68□□□□□ -1.34
HDAC1-204ENST00000471488 POP7O75817 140 aaKnown RBP6.68□□□□□ -1.34
HDAC1-204ENST00000471488 MT-CYBP00156 380 aaPredicted RBP6.68□□□□□ -1.34
HDAC1-204ENST00000471488 HLA-DQB2P05538 268 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 POLBP06746 335 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 CAPN1P07384 714 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 CD99P14209 185 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 ALAS2P22557 587 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 RORAP35398 523 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 TSFMP43897 325 aaKnown RBP6.68□□□□□ -1.34
HDAC1-204ENST00000471488 ART1P52961 327 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 CASP6P55212 293 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 GSCP56915 257 aaPredicted RBP6.68□□□□□ -1.34
HDAC1-204ENST00000471488 ARG2P78540 354 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 TMEM115Q12893 351 aaPredicted RBP6.68□□□□□ -1.34
HDAC1-204ENST00000471488 AIMP2Q13155 320 aaKnown RBP6.68□□□□□ -1.34
HDAC1-204ENST00000471488 MAMLD1Q13495 774 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 TLR1Q15399 786 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 ASIC2Q16515 512 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 PPP2R5EQ16537 467 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 QPCTQ16769 361 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 ZNF630Q2M218 657 aaPredicted RBP6.68□□□□□ -1.34
HDAC1-204ENST00000471488 KHDC1Q4VXA5 237 aaKnown RBP6.68□□□□□ -1.34
HDAC1-204ENST00000471488 CRB2Q5IJ48 1285 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 AGAP9Q5VTM2 703 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 ACAD10Q6JQN1 1059 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 DPY19L2P1Q6NXN4 242 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 TMEM220Q6QAJ8 160 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 IGFL3Q6UXB1 125 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 FAM83HQ6ZRV2 1179 aaPredicted RBP6.68□□□□□ -1.34
HDAC1-204ENST00000471488 NT5DC3Q86UY8 548 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 ZNF547Q8IVP9 402 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 MCOLN2Q8IZK6 566 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 ZNF808Q8N4W9 903 aaPredicted RBP6.68□□□□□ -1.34
HDAC1-204ENST00000471488 TRAM1L1Q8N609 369 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 BEND7Q8N7W2 519 aaPredicted RBP6.68□□□□□ -1.34
HDAC1-204ENST00000471488 NEK11Q8NG66 645 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 PPP4R1Q8TF05 950 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 THOC3Q96J01 351 aaKnown RBP6.68□□□□□ -1.34
HDAC1-204ENST00000471488 LRFN5Q96NI6 719 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 CSPG4P5Q96PW8 444 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 EIF3CQ99613 913 aaKnown RBP6.68□□□□□ -1.34
HDAC1-204ENST00000471488 NUP85Q9BW27 656 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 RAB33BQ9H082 229 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.68□□□□□ -1.34
HDAC1-204ENST00000471488 TAS2R14Q9NYV8 317 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 DHCR7Q9UBM7 475 aaKnown RBP6.68□□□□□ -1.34
HDAC1-204ENST00000471488 BTRCQ9Y297 605 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 ADGRG1Q9Y653 693 aa6.68□□□□□ -1.34
HDAC1-204ENST00000471488 RGSL1A5PLK6 1076 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 ANKRD66B4E2M5 251 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 GPR89AB7ZAQ6 455 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 C19orf84I3L1E1 186 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 AGPSO00116 658 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 CHUKO15111 745 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 KCNN4O15554 427 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 MFSD11O43934 449 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 OR2B3O76000 313 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 PRLP01236 227 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 HBQ1P09105 142 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 SLC35G4P0C7Q5 338 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 GPR89BP0CG08 455 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 MTHFD1P11586 935 aaKnown RBP6.67□□□□□ -1.34
HDAC1-204ENST00000471488 CD1EP15812 388 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 TCF4P15884 667 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 ST6GAL1P15907 406 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 HADHAP40939 763 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 HCAR3P49019 387 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 DCDP81605 110 aaKnown RBP6.67□□□□□ -1.34
HDAC1-204ENST00000471488 OTUD4Q01804 1114 aaKnown RBP6.67□□□□□ -1.34
HDAC1-204ENST00000471488 RBPJQ06330 500 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 NIPAL4Q0D2K0 466 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 Q0VFX4 171 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 MMRN1Q13201 1228 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 BECN1Q14457 450 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 ATP13A5Q4VNC0 1218 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 FNBP1LQ5T0N5 605 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 PRAMEF13Q5VWM6 474 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 CCDC70Q6NSX1 233 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 TIGD7Q6NT04 549 aaPredicted RBP6.67□□□□□ -1.34
HDAC1-204ENST00000471488 MTFR2Q6P444 385 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 SPNS3Q6ZMD2 512 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 POLNQ7Z5Q5 900 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 PPP1R32Q7Z5V6 425 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 TMEM151BQ8IW70 566 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 ELOA2Q8IYF1 753 aaPredicted RBP6.67□□□□□ -1.34
HDAC1-204ENST00000471488 ZNF295-AS1Q8N0V1 137 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 ZNF655Q8N720 491 aaPredicted RBP6.67□□□□□ -1.34
HDAC1-204ENST00000471488 MLKLQ8NB16 471 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 SPDYE1Q8NFV5 336 aaPredicted RBP6.67□□□□□ -1.34
HDAC1-204ENST00000471488 TEKT4Q8WW24 435 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 LCN9Q8WX39 176 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 PTERQ96BW5 349 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 FERD3LQ96RJ6 166 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms