RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 EGFLAMQ63HQ2 1017 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 PTRHD1Q6GMV3 140 aaKnown RBP9.02□□□□□ -0.97
PTPRE-207ENST00000471218 TSPAN33Q86UF1 283 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 PHYKPLQ8IUZ5 450 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 WDR75Q8IWA0 830 aaKnown RBP9.02□□□□□ -0.97
PTPRE-207ENST00000471218 AFAP1L2Q8N4X5 818 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 GPR26Q8NDV2 337 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 ACVR1CQ8NER5 493 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 CD200R1Q8TD46 325 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 KCTD4Q8WVF5 259 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 DNASE2BQ8WZ79 361 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 L3HYPDHQ96EM0 354 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 DCUN1D1Q96GG9 259 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 SEC16BQ96JE7 1060 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 CNDP1Q96KN2 507 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 HSPA12BQ96MM6 686 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 NDNQ99608 321 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 C1QTNF7Q9BXJ2 289 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 C1QTNF3Q9BXJ4 246 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 DRC3Q9H069 523 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 CAB39LQ9H9S4 337 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 PREBQ9HCU5 417 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 MLXIPLQ9NP71 852 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 ZDHHC4Q9NPG8 344 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 XPR1Q9UBH6 696 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 DKK4Q9UBT3 224 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 KLK13Q9UKR3 277 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 RUVBL2Q9Y230 463 aaKnown RBP9.02□□□□□ -0.97
PTPRE-207ENST00000471218 STK38LQ9Y2H1 464 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 CRYL1Q9Y2S2 319 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 PCDHGB2Q9Y5G2 931 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 USH1CQ9Y6N9 552 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 FREM2Q5SZK8 3169 aa9.02□□□□□ -0.97
PTPRE-207ENST00000471218 PLXND1Q9Y4D7 1925 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 A0A1W2PQF6 199 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 VEGFDO43915 354 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 KLK8O60259 260 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 NUAK1O60285 661 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 DFNA5O60443 496 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 TSPAN12O95859 305 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 TOP3BO95985 862 aaKnown RBP9.01□□□□□ -0.97
PTPRE-207ENST00000471218 ENO2P09104 434 aaPredicted RBP9.01□□□□□ -0.97
PTPRE-207ENST00000471218 ACADMP11310 421 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 CDK4P11802 303 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 TFEBP19484 476 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 BGNP21810 368 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 FMO4P31512 558 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 LIG3P49916 1009 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 ABCE1P61221 599 aaKnown RBP9.01□□□□□ -0.97
PTPRE-207ENST00000471218 IRX1P78414 480 aaPredicted RBP9.01□□□□□ -0.97
PTPRE-207ENST00000471218 IRF9Q00978 393 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 PRKAA1Q13131 559 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 RCN2Q14257 317 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 CSHL1Q14406 222 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 GBX1Q14549 363 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 PTPRCAPQ14761 206 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 INAVAQ3KP66 663 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 TTC31Q49AM3 519 aaPredicted RBP9.01□□□□□ -0.97
PTPRE-207ENST00000471218 BCL7AQ4VC05 210 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 ATP13A5Q4VNC0 1218 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 GPRC6AQ5T6X5 926 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 PIP5KL1Q5T9C9 394 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 FAM91A1Q658Y4 838 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 KIAA1161Q6NSJ0 714 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 C6orf89Q6UWU4 347 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 ADAMTSL4Q6UY14 1074 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 ZNF771Q7L3S4 317 aaPredicted RBP9.01□□□□□ -0.97
PTPRE-207ENST00000471218 OTOAQ7RTW8 1153 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 HSD11B1LQ7Z5J1 315 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 ISCA2Q86U28 154 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 C10orf107Q8IVU9 208 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 NAXDQ8IW45 347 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 PLD6Q8N2A8 252 aaKnown RBP9.01□□□□□ -0.97
PTPRE-207ENST00000471218 PIWIL2Q8TC59 973 aaKnown RBP9.01□□□□□ -0.97
PTPRE-207ENST00000471218 CXorf40AQ8TE69 158 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 BTN2A2Q8WVV5 523 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 GLYATL1Q969I3 302 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 ARRDC3Q96B67 414 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 NXNL1Q96CM4 212 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 SCYL1Q96KG9 808 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 GPR21Q99679 349 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 WWP1Q9H0M0 922 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 RDH14Q9HBH5 336 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 EML4Q9HC35 981 aaKnown RBP9.01□□□□□ -0.97
PTPRE-207ENST00000471218 BPIFA1Q9NP55 256 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 CACNA2D2Q9NY47 1150 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 VTI1BQ9UEU0 232 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 RALYQ9UKM9 306 aaKnown RBP9.01□□□□□ -0.97
PTPRE-207ENST00000471218 SARDHQ9UL12 918 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 HCN2Q9UL51 889 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 TNPO3Q9Y5L0 923 aaKnown RBP9.01□□□□□ -0.97
PTPRE-207ENST00000471218 FADS3Q9Y5Q0 445 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 MYLKQ15746 1914 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 WDFY3Q8IZQ1 3526 aa9.01□□□□□ -0.97
PTPRE-207ENST00000471218 KNTC1P50748 2209 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 MEI4A8MW99 385 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 TK2O00142 265 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 TOR1BO14657 336 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 SLC16A5O15375 505 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 FLRT2O43155 660 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms