RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 HMGCLP35914 325 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 IST1P53990 364 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 LAPTM5Q13571 262 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 FAM174BQ3ZCQ3 159 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 SBSNQ6UWP8 590 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 CHST9Q7L1S5 443 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 ADAMTSL2Q86TH1 951 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 CLVS1Q8IUQ0 354 aaPredicted RBP16.09■□□□□ 0.17
SLX4-202ENST00000466154 ZUFSPQ96AP4 578 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 MYRFLQ96LU7 910 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 DEFB118Q96PH6 123 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 C9orf16Q9BUW7 83 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 NUSAP1Q9BXS6 441 aaKnown RBP16.09■□□□□ 0.17
SLX4-202ENST00000466154 FAM126AQ9BYI3 521 aaPredicted RBP16.09■□□□□ 0.17
SLX4-202ENST00000466154 CLK4Q9HAZ1 481 aaKnown RBP16.09■□□□□ 0.17
SLX4-202ENST00000466154 PLXNA3P51805 1871 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 H3BNH8 94 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 DFNA5O60443 496 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 LDLRP01130 860 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 COL6A1P12109 1028 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 GABRR2P28476 465 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 PYCR3Q53H96 274 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 XKR7Q5GH72 579 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 LCN8Q6JVE9 175 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 ANKRD46Q86W74 232 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 OR10A6Q8NH74 314 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 ZNF382Q96SR6 550 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 NUDT4Q9NZJ9 180 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 CNOT11Q9UKZ1 510 aaKnown RBP16.09■□□□□ 0.17
SLX4-202ENST00000466154 FADS3Q9Y5Q0 445 aa16.09■□□□□ 0.17
SLX4-202ENST00000466154 FAM234BA2RU67 622 aa16.08■□□□□ 0.17
SLX4-202ENST00000466154 LRATO95237 230 aa16.08■□□□□ 0.17
SLX4-202ENST00000466154 CTSOP43234 321 aaPredicted RBP16.08■□□□□ 0.17
SLX4-202ENST00000466154 TXNL4AP83876 142 aaKnown RBP16.08■□□□□ 0.17
SLX4-202ENST00000466154 NFATC2Q13469 925 aa16.08■□□□□ 0.17
SLX4-202ENST00000466154 C5orf22Q49AR2 442 aa16.08■□□□□ 0.17
SLX4-202ENST00000466154 STK40Q8N2I9 435 aa16.08■□□□□ 0.17
SLX4-202ENST00000466154 BEGAINQ9BUH8 593 aa16.08■□□□□ 0.17
SLX4-202ENST00000466154 CREBZFQ9NS37 354 aa16.08■□□□□ 0.17
SLX4-202ENST00000466154 CFAP97Q9P2B7 532 aa16.08■□□□□ 0.17
SLX4-202ENST00000466154 ZNF490Q9ULM2 529 aaPredicted RBP16.08■□□□□ 0.17
SLX4-202ENST00000466154 CDH23Q9H251 3354 aa16.08■□□□□ 0.17
SLX4-202ENST00000466154 GLYATL1P3A0A0U1RQE8 302 aa16.08■□□□□ 0.16
SLX4-202ENST00000466154 GNGT2O14610 69 aa16.08■□□□□ 0.16
SLX4-202ENST00000466154 EEDO75530 441 aaKnown RBP16.08■□□□□ 0.16
SLX4-202ENST00000466154 PGLSO95336 258 aa16.08■□□□□ 0.16
SLX4-202ENST00000466154 NEK2P51955 445 aa16.08■□□□□ 0.16
SLX4-202ENST00000466154 POM121L1PQ3SYA9 428 aa16.08■□□□□ 0.16
SLX4-202ENST00000466154 PABPC1LQ4VXU2 614 aaKnown RBP16.08■□□□□ 0.16
SLX4-202ENST00000466154 TMEM259Q4ZIN3 620 aa16.08■□□□□ 0.16
SLX4-202ENST00000466154 OGFOD2Q6N063 350 aa16.08■□□□□ 0.16
SLX4-202ENST00000466154 STK32CQ86UX6 486 aa16.08■□□□□ 0.16
SLX4-202ENST00000466154 SLC22A15Q8IZD6 547 aa16.08■□□□□ 0.16
SLX4-202ENST00000466154 HJURPQ8NCD3 748 aaPredicted RBP16.08■□□□□ 0.16
SLX4-202ENST00000466154 ITFG1Q8TB96 612 aa16.08■□□□□ 0.16
SLX4-202ENST00000466154 TFAP2CQ92754 450 aa16.08■□□□□ 0.16
SLX4-202ENST00000466154 AURKBQ96GD4 344 aaPredicted RBP16.08■□□□□ 0.16
SLX4-202ENST00000466154 CAPNS2Q96L46 248 aa16.08■□□□□ 0.16
SLX4-202ENST00000466154 LIMD1Q9UGP4 676 aa16.08■□□□□ 0.16
SLX4-202ENST00000466154 SH3BP1Q9Y3L3 701 aa16.08■□□□□ 0.16
SLX4-202ENST00000466154 ANKRD36A6QL64 1941 aa16.08■□□□□ 0.16
SLX4-202ENST00000466154 UPK3BL1B0FP48 263 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 UPK3BL2E5RIL1 263 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 OTCP00480 354 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 BPIP17213 487 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 SLC5A2P31639 672 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 ZFP36L2P47974 494 aaKnown RBP16.07■□□□□ 0.16
SLX4-202ENST00000466154 EPHB3P54753 998 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 TPD52P55327 224 aaPredicted RBP16.07■□□□□ 0.16
SLX4-202ENST00000466154 NOGQ13253 232 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 APOFQ13790 326 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 BOP1Q14137 746 aaKnown RBP16.07■□□□□ 0.16
SLX4-202ENST00000466154 NEDD8Q15843 81 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 GTDC1Q4AE62 458 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 RETSATQ6NUM9 610 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 TBPL2Q6SJ96 375 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 BBS7Q8IWZ6 715 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 PHACTR4Q8IZ21 702 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 LIX1Q8N485 282 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 DHRSXQ8N5I4 330 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 C2orf49Q9BVC5 232 aaPredicted RBP16.07■□□□□ 0.16
SLX4-202ENST00000466154 SLC52A3Q9NQ40 469 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 GNPTGQ9UJJ9 305 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 CASP8AP2Q9UKL3 1982 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 A0A1W2PQ67 120 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 LOC730098B7Z3J9 87 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 FOXD2O60548 495 aaPredicted RBP16.07■□□□□ 0.16
SLX4-202ENST00000466154 MTA1Q13330 715 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 AASDHQ4L235 1098 aaPredicted RBP16.07■□□□□ 0.16
SLX4-202ENST00000466154 GCNT7Q6ZNI0 430 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 RBFAQ8N0V3 343 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 NAT16Q8N8M0 369 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 PIH1D2Q8WWB5 315 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 ZBTB18Q99592 522 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 DPY30Q9C005 99 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 ACTR8Q9H981 624 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 COMMD8Q9NX08 183 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 PTTG2Q9NZH5 202 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 ULK1O75385 1050 aa16.07■□□□□ 0.16
SLX4-202ENST00000466154 HRH2P25021 359 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms