RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 CCDC15Q0P6D6 951 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 ASPHQ12797 758 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 IFT88Q13099 833 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 IGF2-ASQ6U949 168 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 FAM47EQ6ZV65 393 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 SLC22A18ASQ8N1D0 253 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 LPCAT1Q8NF37 534 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 PPP1R14CQ8TAE6 165 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 IFI44Q8TCB0 444 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 MAPK15Q8TD08 544 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 KLK6Q92876 244 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 HDAC10Q969S8 669 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 FAM131CQ96AQ9 280 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 EXOC2Q96KP1 924 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 TRIM55Q9BYV6 548 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 FAM96AQ9H5X1 160 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 ACTR5Q9H9F9 607 aaPredicted RBP13.66□□□□□ -0.22
HDAC6-215ENST00000465457 POPDC3Q9HBV1 291 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 CATSPERZQ9NTU4 200 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 SARDHQ9UL12 918 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 TRPM6Q9BX84 2022 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 EDDM13A0A1B0GTR0 161 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 TTC24A2A3L6 582 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-215ENST00000465457 WDR91A4D1P6 747 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 CCT8L1PA6NM43 557 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 GOLGA8TH3BQL2 631 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 CD3EAPO15446 510 aaKnown RBP13.65□□□□□ -0.22
HDAC6-215ENST00000465457 LZTS3O60299 673 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-215ENST00000465457 ADH1BP00325 375 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 PRLP01236 227 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 NTRK1P04629 796 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 THEGLP0DJG4 465 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 C5AR1P21730 350 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 RBMS1P29558 406 aaKnown RBP13.65□□□□□ -0.22
HDAC6-215ENST00000465457 SERPINA4P29622 427 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 VASPP50552 380 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-215ENST00000465457 SNRPD1P62314 119 aaKnown RBP13.65□□□□□ -0.22
HDAC6-215ENST00000465457 MPP1Q00013 466 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 TLE1Q04724 770 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 RAD51Q06609 339 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 BCL2L1Q07817 233 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 TRAF2Q12933 501 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 CTBP1Q13363 440 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 TGIF1Q15583 401 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 CDKN3Q16667 212 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 FASTKD1Q53R41 847 aaKnown RBP13.65□□□□□ -0.22
HDAC6-215ENST00000465457 AGBL4Q5VU57 503 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 FAM45BPQ6NSW5 357 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 GUSBP11Q6P575 273 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 ZNF574Q6ZN55 896 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-215ENST00000465457 OTOAQ7RTW8 1153 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 CMC1Q7Z7K0 106 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 IQCHQ86VS3 1027 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 DENND6AQ8IWF6 608 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 PLPP6Q8IY26 295 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 APCDD1Q8J025 514 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 PCDH20Q8N6Y1 951 aaKnown RBP13.65□□□□□ -0.22
HDAC6-215ENST00000465457 TMEM145Q8NBT3 493 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 OR13H1Q8NG92 308 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 OR2AP1Q8NGE2 309 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 OR4L1Q8NH43 312 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 FAM45AQ8TCE6 357 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 ELMO2Q96JJ3 720 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 DNAJC1Q96KC8 554 aaKnown RBP13.65□□□□□ -0.22
HDAC6-215ENST00000465457 NMRAL1Q9HBL8 299 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 MAGEE1Q9HCI5 957 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 THAP1Q9NVV9 213 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 FCF1Q9Y324 198 aaKnown RBP13.65□□□□□ -0.22
HDAC6-215ENST00000465457 ACTL7AQ9Y615 435 aa13.65□□□□□ -0.22
HDAC6-215ENST00000465457 TMEM114B3SHH9 223 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 H7C0S8 307 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 K7ESM1 405 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 HTRA2O43464 458 aaPredicted RBP13.64□□□□□ -0.23
HDAC6-215ENST00000465457 PLRG1O43660 514 aaKnown RBP13.64□□□□□ -0.23
HDAC6-215ENST00000465457 PGLSO95336 258 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 SERPINE1P05121 402 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 GP1BAP07359 652 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 CPA3P15088 417 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 BGNP21810 368 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 NFKBIAP25963 317 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 GABRB3P28472 473 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 STC1P52823 247 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 TAS2R38P59533 333 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 SFSWAPQ12872 951 aaKnown RBP13.64□□□□□ -0.23
HDAC6-215ENST00000465457 STX3Q13277 289 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 SETDB1Q15047 1291 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 CHI3L2Q15782 390 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 TYSND1Q2T9J0 566 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 LACTB2Q53H82 288 aaPredicted RBP13.64□□□□□ -0.23
HDAC6-215ENST00000465457 SPDYAQ5MJ70 313 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 HIST2H2BCQ6DN03 193 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 KLC3Q6P597 504 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 C22orf39Q6P5X5 142 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 TRPM8Q7Z2W7 1104 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 TBC1D1Q86TI0 1168 aaPredicted RBP13.64□□□□□ -0.23
HDAC6-215ENST00000465457 CRLF3Q8IUI8 442 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 GPATCH11Q8N954 259 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.64□□□□□ -0.23
HDAC6-215ENST00000465457 KLHDC7BQ96G42 594 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 CCNL2Q96S94 520 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms