RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 BRAFP15056 766 aa16.6■□□□□ 0.25
USP39-211ENST00000465282 HHEXQ03014 270 aa16.6■□□□□ 0.25
USP39-211ENST00000465282 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.6■□□□□ 0.25
USP39-211ENST00000465282 C3orf62Q6ZUJ4 267 aa16.6■□□□□ 0.25
USP39-211ENST00000465282 ERMP1Q7Z2K6 904 aa16.6■□□□□ 0.25
USP39-211ENST00000465282 SLC26A11Q86WA9 606 aa16.6■□□□□ 0.25
USP39-211ENST00000465282 UNC5BQ8IZJ1 945 aa16.6■□□□□ 0.25
USP39-211ENST00000465282 PATE1Q8WXA2 126 aa16.6■□□□□ 0.25
USP39-211ENST00000465282 CDKL2Q92772 493 aa16.6■□□□□ 0.25
USP39-211ENST00000465282 TMEM159Q96B96 161 aa16.6■□□□□ 0.25
USP39-211ENST00000465282 RHOXF2Q9BQY4 288 aa16.6■□□□□ 0.25
USP39-211ENST00000465282 LATS2Q9NRM7 1088 aa16.6■□□□□ 0.25
USP39-211ENST00000465282 POT1Q9NUX5 634 aa16.6■□□□□ 0.25
USP39-211ENST00000465282 ZFATQ9P243 1243 aa16.6■□□□□ 0.25
USP39-211ENST00000465282 KLHL42Q9P2K6 505 aa16.6■□□□□ 0.25
USP39-211ENST00000465282 CORO1CQ9ULV4 474 aaPredicted RBP16.6■□□□□ 0.25
USP39-211ENST00000465282 CRYL1Q9Y2S2 319 aa16.6■□□□□ 0.25
USP39-211ENST00000465282 RNF215Q9Y6U7 377 aa16.6■□□□□ 0.25
USP39-211ENST00000465282 UNC13CQ8NB66 2214 aa16.6■□□□□ 0.25
USP39-211ENST00000465282 CACNA1AO00555 2505 aa16.59■□□□□ 0.25
USP39-211ENST00000465282 SLC5A10A0PJK1 596 aa16.59■□□□□ 0.25
USP39-211ENST00000465282 IFRD1O00458 451 aaPredicted RBP16.59■□□□□ 0.25
USP39-211ENST00000465282 SLU7O95391 586 aaKnown RBP16.59■□□□□ 0.25
USP39-211ENST00000465282 VIPP01282 170 aa16.59■□□□□ 0.25
USP39-211ENST00000465282 MYF5P13349 255 aa16.59■□□□□ 0.25
USP39-211ENST00000465282 NDUFS1P28331 727 aa16.59■□□□□ 0.25
USP39-211ENST00000465282 FMO4P31512 558 aa16.59■□□□□ 0.25
USP39-211ENST00000465282 CARSP49589 748 aaKnown RBP16.59■□□□□ 0.25
USP39-211ENST00000465282 MAZP56270 477 aaKnown RBP16.59■□□□□ 0.25
USP39-211ENST00000465282 UBE2IP63279 158 aaKnown RBP16.59■□□□□ 0.25
USP39-211ENST00000465282 TMED2Q15363 201 aa16.59■□□□□ 0.25
USP39-211ENST00000465282 SEPT7Q16181 437 aaKnown RBP16.59■□□□□ 0.25
USP39-211ENST00000465282 CLPPQ16740 277 aaPredicted RBP16.59■□□□□ 0.25
USP39-211ENST00000465282 SYTL3Q4VX76 610 aa16.59■□□□□ 0.25
USP39-211ENST00000465282 CAPRIN2Q6IMN6 1127 aaKnown RBP16.59■□□□□ 0.25
USP39-211ENST00000465282 TRMT10BQ6PF06 316 aaKnown RBP16.59■□□□□ 0.25
USP39-211ENST00000465282 TRIM48Q8IWZ4 208 aa16.59■□□□□ 0.25
USP39-211ENST00000465282 CACTIN-AS1Q8N1I8 211 aa16.59■□□□□ 0.25
USP39-211ENST00000465282 NAT14Q8WUY8 206 aa16.59■□□□□ 0.25
USP39-211ENST00000465282 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.59■□□□□ 0.25
USP39-211ENST00000465282 CCDC74AQ96AQ1 378 aa16.59■□□□□ 0.25
USP39-211ENST00000465282 CXorf40BQ96DE9 158 aa16.59■□□□□ 0.25
USP39-211ENST00000465282 CCDC3Q9BQI4 270 aa16.59■□□□□ 0.25
USP39-211ENST00000465282 ABCG4Q9H172 646 aa16.59■□□□□ 0.25
USP39-211ENST00000465282 EPB41L1Q9H4G0 881 aa16.59■□□□□ 0.25
USP39-211ENST00000465282 ZNF624Q9P2J8 865 aaPredicted RBP16.59■□□□□ 0.25
USP39-211ENST00000465282 WDR37Q9Y2I8 494 aa16.59■□□□□ 0.25
USP39-211ENST00000465282 COLEC10Q9Y6Z7 277 aa16.59■□□□□ 0.25
USP39-211ENST00000465282 PTPRBP23467 1997 aa16.58■□□□□ 0.25
USP39-211ENST00000465282 PPM1DO15297 605 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 GPC4O75487 556 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 TCEA3O75764 348 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 HAUS5O94927 633 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 SLCO2B1O94956 709 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 KCNA4P22459 653 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 AOAHP28039 575 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 ECHS1P30084 290 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 SSTR1P30872 391 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 CCR7P32248 378 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 SLC19A1P41440 591 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 EPHA4P54764 986 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 SLMAPQ14BN4 828 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 CLCA4Q14CN2 919 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 RPE65Q16518 533 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 CTSL3PQ5NE16 218 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 PLEKHS1Q5SXH7 462 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 XKR5Q6UX68 686 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 OTOAQ7RTW8 1153 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 SFTPA2Q8IWL1 248 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 GALNT15Q8N3T1 639 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 KCNJ9Q92806 393 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 C9orf72Q96LT7 481 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 WWP1Q9H0M0 922 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 OR52A5Q9H2C5 316 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 LRRC4CQ9HCJ2 640 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 SLC40A1Q9NP59 571 aa16.58■□□□□ 0.24
USP39-211ENST00000465282 FBXO6Q9NRD1 293 aaPredicted RBP16.58■□□□□ 0.24
USP39-211ENST00000465282 SCHIP1Q9P0W5 487 aaPredicted RBP16.58■□□□□ 0.24
USP39-211ENST00000465282 TRBV23OR9-2A0A075B6M9 112 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 TCRBV9S1A1TA0A576 114 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 E5RI56 91 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 OPA1O60313 960 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 AHSGP02765 367 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 MTHFD1P11586 935 aaKnown RBP16.57■□□□□ 0.24
USP39-211ENST00000465282 CHRM3P20309 590 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 CD9P21926 228 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 STX2P32856 288 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 PHBP35232 272 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 SKIV2L2P42285 1042 aaKnown RBP16.57■□□□□ 0.24
USP39-211ENST00000465282 GPLD1P80108 840 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 MPP1Q00013 466 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 SQSTM1Q13501 440 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 BOP1Q14137 746 aaKnown RBP16.57■□□□□ 0.24
USP39-211ENST00000465282 SMAD1Q15797 465 aaKnown RBP16.57■□□□□ 0.24
USP39-211ENST00000465282 TTLL9Q3SXZ7 439 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 ZNF789Q5FWF6 425 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 PERM1Q5SV97 790 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 TEX35Q5T0J7 233 aa16.57■□□□□ 0.24
USP39-211ENST00000465282 N4BP2L1Q5TBK1 243 aaPredicted RBP16.57■□□□□ 0.24
USP39-211ENST00000465282 UGT3A1Q6NUS8 523 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms