RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 NCK1P16333 377 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 HLA-FP30511 346 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 HMOX2P30519 316 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 OXTRP30559 389 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 LIPEQ05469 1076 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 GRAMD4Q6IC98 578 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 LCN8Q6JVE9 175 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 MBOAT1Q6ZNC8 495 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 ZNF510Q9Y2H8 683 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 AQP12BA6NM10 295 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 FFAR3O14843 346 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 LSM1O15116 133 aaKnown RBP20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 GPR42O15529 346 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 C8AP07357 584 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 IRX1P78414 480 aaPredicted RBP20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 PRKCQQ04759 706 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 RFTN2Q52LD8 501 aaPredicted RBP20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 THEMIS2Q5TEJ8 643 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 LRRC66Q68CR7 880 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 NANOGP8Q6NSW7 305 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 ERMP1Q7Z2K6 904 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 AQP12AQ8IXF9 295 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 SLC22A17Q8WUG5 538 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 ASIC4Q96FT7 647 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 TMEM79Q9BSE2 394 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 TRIM15Q9C019 465 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 ZBP1Q9H171 429 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 NANOGQ9H9S0 305 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 LATS2Q9NRM7 1088 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 WWOXQ9NZC7 414 aa20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 POLR3HQ9Y535 204 aaPredicted RBP20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 PRRC2BQ5JSZ5 2229 aaKnown RBP20.04■□□□□ 0.8
TUBGCP3-204ENST00000464139 SAC3D1A6NKF1 404 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 CLTBP09497 229 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 AP5B1Q2VPB7 878 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 MYLK3Q32MK0 819 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 MACC1Q6ZN28 852 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 ZBTB49Q6ZSB9 765 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 ZFAND4Q86XD8 727 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 KCTD14Q9BQ13 255 aaPredicted RBP20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 HTATIP2Q9BUP3 242 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 SPATA16Q9BXB7 569 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 ACTL8Q9H568 366 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 ANGPTL3Q9Y5C1 460 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 ZFC3H1O60293 1989 aaKnown RBP20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 SOCS2O14508 198 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 FAM58BPP0C7Q3 252 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 SNRPD1P62314 119 aaKnown RBP20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 EMX2Q04743 252 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 PRKG2Q13237 762 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 INPP5AQ14642 412 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 CNPY1Q3B7I2 92 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 CYP20A1Q6UW02 462 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 PRPF18Q99633 342 aaKnown RBP20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 SLC2A11Q9BYW1 496 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 HEBP1Q9NRV9 189 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 HCFC1R1Q9NWW0 138 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 LTBP2Q14767 1821 aa20.03■□□□□ 0.8
TUBGCP3-204ENST00000464139 INPP4BO15327 924 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 CCL16O15467 120 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 RSL1D1O76021 490 aaKnown RBP20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 FESP07332 822 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 CCR2P41597 374 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 DGKQP52824 942 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 PLIN5Q00G26 463 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 GPR33Q49SQ1 333 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 LYPLAL1Q5VWZ2 237 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 ASTLQ6HA08 431 aaPredicted RBP20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 CBARPQ8N350 705 aaPredicted RBP20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 RHBDF1Q96CC6 855 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 LMLNQ96KR4 655 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 CD244Q9BZW8 370 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 ZDHHC6Q9H6R6 413 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 FARSBQ9NSD9 589 aaKnown RBP20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 OPTCQ9UBM4 332 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 MAFFQ9ULX9 164 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 ZNF106Q9H2Y7 1883 aaKnown RBP20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 OR6B1O95007 311 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 CTSAP10619 480 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 BMP2P12643 396 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 ATP6V1B1P15313 513 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 PSMC3P17980 439 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 LHCGRP22888 699 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 PSMA4P25789 261 aaKnown RBP20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 PTSQ03393 145 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 ATP13A5Q4VNC0 1218 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 C22orf39Q6P5X5 142 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 TPRG1Q6ZUI0 275 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 CHERPQ8IWX8 916 aaKnown RBP20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 ADGRG5Q8IZF4 528 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 AHI1Q8N157 1196 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 ANKFN1Q8N957 763 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 SCRN2Q96FV2 425 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 SUV39H2Q9H5I1 410 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 SLCO3A1Q9UIG8 710 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 RNF11Q9Y3C5 154 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 SLC4A7Q9Y6M7 1214 aa20.02■□□□□ 0.8
TUBGCP3-204ENST00000464139 TNFAIP8O95379 198 aa20.01■□□□□ 0.79
TUBGCP3-204ENST00000464139 CXCL14O95715 111 aa20.01■□□□□ 0.79
TUBGCP3-204ENST00000464139 PABPC4LP0CB38 370 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms