RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 SLITRK4Q8IW52 837 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 LSMEM2Q8N112 164 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 GPR150Q8NGU9 434 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 OR4L1Q8NH43 312 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 WDR48Q8TAF3 677 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 ZNF398Q8TD17 642 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 KCNE4Q8WWG9 221 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 OR2M4Q96R27 311 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 ZSCAN5AQ9BUG6 496 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 EPB41L4BQ9H329 900 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 THSD1Q9NS62 852 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 C20orf96Q9NUD7 363 aaPredicted RBP15.34■□□□□ 0.05
SDF4-204ENST00000459994 SLC30A1Q9Y6M5 507 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 A0A087WUV0 522 aaPredicted RBP15.33■□□□□ 0.04
SDF4-204ENST00000459994 KLK10O43240 276 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 NUDT21O43809 227 aaKnown RBP15.33■□□□□ 0.04
SDF4-204ENST00000459994 PRAMEF1O95521 474 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 ACSL3O95573 720 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 C1QAP02745 245 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 ITGALP20701 1170 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 RBMS1P29558 406 aaKnown RBP15.33■□□□□ 0.04
SDF4-204ENST00000459994 CCKBRP32239 447 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 FOXN2P32314 431 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 ACTR1BP42025 376 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 ACTR1AP61163 376 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 CFHR1Q03591 330 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 ZFP36L1Q07352 338 aaKnown RBP15.33■□□□□ 0.04
SDF4-204ENST00000459994 THOC5Q13769 683 aaKnown RBP15.33■□□□□ 0.04
SDF4-204ENST00000459994 ITGA9Q13797 1035 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 CHRNA6Q15825 494 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 UAP1Q16222 522 aaPredicted RBP15.33■□□□□ 0.04
SDF4-204ENST00000459994 NKAIN2Q5VXU1 208 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 ALS2CLQ60I27 953 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 TRMT10BQ6PF06 316 aaKnown RBP15.33■□□□□ 0.04
SDF4-204ENST00000459994 FAM151BQ6UXP7 276 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 CAPN12Q6ZSI9 719 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 RAB11FIP2Q7L804 512 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 ZNF438Q7Z4V0 828 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 SNX20Q7Z614 316 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 CLEC14AQ86T13 490 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 KCNMB4Q86W47 210 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 ZNF761Q86XN6 746 aaPredicted RBP15.33■□□□□ 0.04
SDF4-204ENST00000459994 OR6C4Q8NGE1 309 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 GABPB2Q8TAK5 448 aaPredicted RBP15.33■□□□□ 0.04
SDF4-204ENST00000459994 CALML6Q8TD86 181 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 NUDT22Q9BRQ3 303 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 FAM167BQ9BTA0 163 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 SMOXQ9NWM0 555 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 SSUH2Q9Y2M2 353 aa15.33■□□□□ 0.04
SDF4-204ENST00000459994 ATMQ13315 3056 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 TRBV5-4A0A0C4DH59 114 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 FAM159BA6NKW6 160 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 PLD2O14939 933 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 CD3EAPO15446 510 aaKnown RBP15.32■□□□□ 0.04
SDF4-204ENST00000459994 ASMTLO95671 621 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 PNLIPP16233 465 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 ALDH4A1P30038 563 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 SLC5A2P31639 672 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 HSD17B3P37058 310 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 CLN3Q13286 438 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 NFATC2Q13469 925 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 SLC29A2Q14542 456 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 C16orf72Q14CZ0 275 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 AMZ1Q400G9 498 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 FASTKD1Q53R41 847 aaKnown RBP15.32■□□□□ 0.04
SDF4-204ENST00000459994 HSP90AA5PQ58FG0 334 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 UBAP2Q5T6F2 1119 aaKnown RBP15.32■□□□□ 0.04
SDF4-204ENST00000459994 ARHGAP40Q5TG30 622 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 USP53Q70EK8 1073 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 CNTN4Q8IWV2 1026 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 UNC5BQ8IZJ1 945 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 FBXO39Q8N4B4 442 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 FBF1Q8TES7 1133 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 UBLCP1Q8WVY7 318 aaPredicted RBP15.32■□□□□ 0.04
SDF4-204ENST00000459994 CDKL2Q92772 493 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.32■□□□□ 0.046e-6■□□□□ 9.8
SDF4-204ENST00000459994 GRAMD1AQ96CP6 724 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 VPS35Q96QK1 796 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 CYTH2Q99418 400 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 SPATA16Q9BXB7 569 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 ACSS3Q9H6R3 686 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 ASB8Q9H765 288 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 CATSPERZQ9NTU4 200 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 TMEM9Q9P0T7 183 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 PISDQ9UG56 409 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 LOXL2Q9Y4K0 774 aa15.32■□□□□ 0.04
SDF4-204ENST00000459994 OR51F1A6NGY5 319 aa15.31■□□□□ 0.04
SDF4-204ENST00000459994 C1QL1O75973 258 aa15.31■□□□□ 0.04
SDF4-204ENST00000459994 ITGA2BP08514 1039 aa15.31■□□□□ 0.04
SDF4-204ENST00000459994 ERVK-10P10266 1014 aa15.31■□□□□ 0.04
SDF4-204ENST00000459994 OGNP20774 298 aaKnown RBP15.31■□□□□ 0.04
SDF4-204ENST00000459994 CD1CP29017 333 aa15.31■□□□□ 0.04
SDF4-204ENST00000459994 CSF2RBP32927 897 aa15.31■□□□□ 0.04
SDF4-204ENST00000459994 NAB1Q13506 487 aa15.31■□□□□ 0.04
SDF4-204ENST00000459994 NR1D2Q14995 579 aa15.31■□□□□ 0.04
SDF4-204ENST00000459994 TGIF1Q15583 401 aa15.31■□□□□ 0.04
SDF4-204ENST00000459994 ATP13A5Q4VNC0 1218 aa15.31■□□□□ 0.04
SDF4-204ENST00000459994 ZRANB3Q5FWF4 1079 aa15.31■□□□□ 0.04
SDF4-204ENST00000459994 AARS2Q5JTZ9 985 aaKnown RBP15.31■□□□□ 0.04
SDF4-204ENST00000459994 TEDDM1Q5T9Z0 273 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms