RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 C12orf66Q96MD2 445 aa22.6■■□□□ 1.21
PTPRA-208ENST00000455631 BARD1Q99728 777 aaKnown RBP22.6■■□□□ 1.21
PTPRA-208ENST00000455631 WWP1Q9H0M0 922 aa22.6■■□□□ 1.21
PTPRA-208ENST00000455631 THAP2Q9H0W7 228 aa22.6■■□□□ 1.21
PTPRA-208ENST00000455631 CBX8Q9HC52 389 aa22.6■■□□□ 1.21
PTPRA-208ENST00000455631 AIPL1Q9NZN9 384 aa22.6■■□□□ 1.21
PTPRA-208ENST00000455631 SLC24A2Q9UI40 661 aa22.6■■□□□ 1.21
PTPRA-208ENST00000455631 SPO11Q9Y5K1 396 aa22.6■■□□□ 1.21
PTPRA-208ENST00000455631 GPR39O43194 453 aa22.59■■□□□ 1.21
PTPRA-208ENST00000455631 SKILP12757 684 aa22.59■■□□□ 1.21
PTPRA-208ENST00000455631 POLR2CP19387 275 aaPredicted RBP22.59■■□□□ 1.21
PTPRA-208ENST00000455631 HLA-DPA1P20036 260 aa22.59■■□□□ 1.21
PTPRA-208ENST00000455631 PREPP48147 710 aa22.59■■□□□ 1.21
PTPRA-208ENST00000455631 ADCY2Q08462 1091 aa22.59■■□□□ 1.21
PTPRA-208ENST00000455631 PPIDQ08752 370 aaKnown RBP22.59■■□□□ 1.21
PTPRA-208ENST00000455631 PRKAA1Q13131 559 aa22.59■■□□□ 1.21
PTPRA-208ENST00000455631 LLGL1Q15334 1064 aa22.59■■□□□ 1.21
PTPRA-208ENST00000455631 ZNF789Q5FWF6 425 aa22.59■■□□□ 1.21
PTPRA-208ENST00000455631 TMEM220Q6QAJ8 160 aa22.59■■□□□ 1.21
PTPRA-208ENST00000455631 CUZD1Q86UP6 607 aa22.59■■□□□ 1.21
PTPRA-208ENST00000455631 NT5DC3Q86UY8 548 aa22.59■■□□□ 1.21
PTPRA-208ENST00000455631 PQLC3Q8N755 202 aa22.59■■□□□ 1.21
PTPRA-208ENST00000455631 AGAP3Q96P47 875 aa22.59■■□□□ 1.21
PTPRA-208ENST00000455631 INSM2Q96T92 566 aaPredicted RBP22.59■■□□□ 1.21
PTPRA-208ENST00000455631 XPO4Q9C0E2 1151 aaKnown RBP22.59■■□□□ 1.21
PTPRA-208ENST00000455631 ZNF552Q9H707 407 aaPredicted RBP22.59■■□□□ 1.21
PTPRA-208ENST00000455631 OTOGQ6ZRI0 2925 aa22.58■■□□□ 1.21
PTPRA-208ENST00000455631 POLEQ07864 2286 aa22.58■■□□□ 1.21
PTPRA-208ENST00000455631 LDB2O43679 373 aa22.58■■□□□ 1.21
PTPRA-208ENST00000455631 IPO13O94829 963 aaKnown RBP22.58■■□□□ 1.21
PTPRA-208ENST00000455631 AGXTP21549 392 aa22.58■■□□□ 1.21
PTPRA-208ENST00000455631 PDK2Q15119 407 aa22.58■■□□□ 1.21
PTPRA-208ENST00000455631 ZRSR2Q15696 482 aaKnown RBP22.58■■□□□ 1.21
PTPRA-208ENST00000455631 DCAF10Q5QP82 559 aa22.58■■□□□ 1.21
PTPRA-208ENST00000455631 CCDC70Q6NSX1 233 aa22.58■■□□□ 1.21
PTPRA-208ENST00000455631 Q6ZS92 163 aa22.58■■□□□ 1.21
PTPRA-208ENST00000455631 MCEMP1Q8IX19 187 aa22.58■■□□□ 1.21
PTPRA-208ENST00000455631 IP6K3Q96PC2 410 aa22.58■■□□□ 1.21
PTPRA-208ENST00000455631 DPH2Q9BQC3 489 aaPredicted RBP22.58■■□□□ 1.21
PTPRA-208ENST00000455631 DHRS4Q9BTZ2 278 aa22.58■■□□□ 1.21
PTPRA-208ENST00000455631 KIR3DX1Q9H7L2 352 aa22.58■■□□□ 1.21
PTPRA-208ENST00000455631 FAM8A1Q9UBU6 413 aa22.58■■□□□ 1.21
PTPRA-208ENST00000455631 POMT2Q9UKY4 750 aa22.58■■□□□ 1.21
PTPRA-208ENST00000455631 OSGIN2Q9Y236 505 aa22.58■■□□□ 1.21
PTPRA-208ENST00000455631 MDC1Q14676 2089 aaKnown RBP22.58■■□□□ 1.2
PTPRA-208ENST00000455631 MYO1FO00160 1098 aa22.57■■□□□ 1.2
PTPRA-208ENST00000455631 PEX12O00623 359 aa22.57■■□□□ 1.2
PTPRA-208ENST00000455631 KLHL41O60662 606 aa22.57■■□□□ 1.2
PTPRA-208ENST00000455631 ATXN8OSP0DMR3 200 aa22.57■■□□□ 1.2
PTPRA-208ENST00000455631 LDLRAP1Q5SW96 308 aa22.57■■□□□ 1.2
PTPRA-208ENST00000455631 METRNLQ641Q3 311 aa22.57■■□□□ 1.2
PTPRA-208ENST00000455631 MAP7D3Q8IWC1 876 aa22.57■■□□□ 1.2
PTPRA-208ENST00000455631 SPDYE1Q8NFV5 336 aaPredicted RBP22.57■■□□□ 1.2
PTPRA-208ENST00000455631 FAF2Q96CS3 445 aa22.57■■□□□ 1.2
PTPRA-208ENST00000455631 SRPK1Q96SB4 655 aaKnown RBP22.57■■□□□ 1.2
PTPRA-208ENST00000455631 HSD3B7Q9H2F3 369 aa22.57■■□□□ 1.2
PTPRA-208ENST00000455631 SYTL2Q9HCH5 934 aa22.57■■□□□ 1.2
PTPRA-208ENST00000455631 IL26Q9NPH9 171 aa22.57■■□□□ 1.2
PTPRA-208ENST00000455631 C1GALT1Q9NS00 363 aa22.57■■□□□ 1.2
PTPRA-208ENST00000455631 DNMT3AQ9Y6K1 912 aaPredicted RBP22.57■■□□□ 1.2
PTPRA-208ENST00000455631 GSAPA4D1B5 854 aa22.56■■□□□ 1.2
PTPRA-208ENST00000455631 PRSS44E7EML9 344 aa22.56■■□□□ 1.2
PTPRA-208ENST00000455631 E7EQ34 232 aa22.56■■□□□ 1.2
PTPRA-208ENST00000455631 ZG16O60844 167 aa22.56■■□□□ 1.2
PTPRA-208ENST00000455631 KLF7O75840 302 aaPredicted RBP22.56■■□□□ 1.2
PTPRA-208ENST00000455631 NDST3O95803 873 aa22.56■■□□□ 1.2
PTPRA-208ENST00000455631 MT-CYBP00156 380 aaPredicted RBP22.56■■□□□ 1.2
PTPRA-208ENST00000455631 SPAM1P38567 509 aa22.56■■□□□ 1.2
PTPRA-208ENST00000455631 HADHAP40939 763 aa22.56■■□□□ 1.2
PTPRA-208ENST00000455631 LMAN1P49257 510 aa22.56■■□□□ 1.2
PTPRA-208ENST00000455631 AP1B1Q10567 949 aa22.56■■□□□ 1.2
PTPRA-208ENST00000455631 PPP2R5EQ16537 467 aa22.56■■□□□ 1.2
PTPRA-208ENST00000455631 FNBP1LQ5T0N5 605 aa22.56■■□□□ 1.2
PTPRA-208ENST00000455631 ZFYVE27Q5T4F4 411 aa22.56■■□□□ 1.2
PTPRA-208ENST00000455631 SP5Q6BEB4 398 aaPredicted RBP22.56■■□□□ 1.2
PTPRA-208ENST00000455631 FAM151BQ6UXP7 276 aa22.56■■□□□ 1.2
PTPRA-208ENST00000455631 SPOCD1Q6ZMY3 1216 aa22.56■■□□□ 1.2
PTPRA-208ENST00000455631 CPNE8Q86YQ8 564 aa22.56■■□□□ 1.2
PTPRA-208ENST00000455631 BEND7Q8N7W2 519 aaPredicted RBP22.56■■□□□ 1.2
PTPRA-208ENST00000455631 DDHD1Q8NEL9 900 aa22.56■■□□□ 1.2
PTPRA-208ENST00000455631 OR4E2Q8NGC2 313 aa22.56■■□□□ 1.2
PTPRA-208ENST00000455631 SPATA22Q8NHS9 363 aa22.56■■□□□ 1.2
PTPRA-208ENST00000455631 ZFPM2Q8WW38 1151 aa22.56■■□□□ 1.2
PTPRA-208ENST00000455631 ZBTB20Q9HC78 741 aaPredicted RBP22.56■■□□□ 1.2
PTPRA-208ENST00000455631 SERTAD3Q9UJW9 196 aa22.56■■□□□ 1.2
PTPRA-208ENST00000455631 MASP2O00187 686 aa22.55■■□□□ 1.2
PTPRA-208ENST00000455631 MAP3K7O43318 606 aa22.55■■□□□ 1.2
PTPRA-208ENST00000455631 ZNF749O43361 778 aa22.55■■□□□ 1.2
PTPRA-208ENST00000455631 UGT1A9O60656 530 aa22.55■■□□□ 1.2
PTPRA-208ENST00000455631 IGHEP01854 428 aa22.55■■□□□ 1.2
PTPRA-208ENST00000455631 SLC35G4P0C7Q5 338 aa22.55■■□□□ 1.2
PTPRA-208ENST00000455631 UGT1A6P19224 532 aa22.55■■□□□ 1.2
PTPRA-208ENST00000455631 UGT1A1P22309 533 aa22.55■■□□□ 1.2
PTPRA-208ENST00000455631 UGT1A4P22310 534 aa22.55■■□□□ 1.2
PTPRA-208ENST00000455631 HMGCLP35914 325 aa22.55■■□□□ 1.2
PTPRA-208ENST00000455631 FOLR3P41439 243 aa22.55■■□□□ 1.2
PTPRA-208ENST00000455631 KRT33BQ14525 404 aa22.55■■□□□ 1.2
PTPRA-208ENST00000455631 SSPNQ14714 243 aa22.55■■□□□ 1.2
PTPRA-208ENST00000455631 MLIPQ5VWP3 458 aa22.55■■□□□ 1.2
PTPRA-208ENST00000455631 DET1Q7L5Y6 550 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms