RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 MAFKO60675 156 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 STC2O76061 302 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 NUDT14O95848 222 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 PRPS2P11908 318 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 ITGA2P17301 1181 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 FOLH1Q04609 750 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 DGCR6Q14129 220 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 FAM174BQ3ZCQ3 159 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 CLLU1OSQ5K130 101 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 REP15Q6BDI9 236 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 TMEM135Q86UB9 458 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 AMZ2Q86W34 360 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 AHI1Q8N157 1196 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 TERB1Q8NA31 727 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 ADCY4Q8NFM4 1077 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 BPIFB6Q8NFQ5 453 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 MIEF2Q96C03 454 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 ZNF778Q96MU6 729 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 CDK15Q96Q40 435 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 OSBPL11Q9BXB4 747 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 DGCR6LQ9BY27 220 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 BACE2Q9Y5Z0 518 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 NHSQ6T4R5 1651 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 LCHNA4D1U4 455 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 PI15O43692 258 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 SERPINB7O75635 380 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 BCL10O95999 233 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 PAICSP22234 425 aaKnown RBP9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 GDI1P31150 447 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 TRIM25Q14258 630 aaKnown RBP9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 PARGQ86W56 976 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 TSPAN14Q8NG11 270 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 POP5Q969H6 163 aaKnown RBP9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 RAD9AQ99638 391 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 MCMBPQ9BTE3 642 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 EPB41L4BQ9H329 900 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 ALG2Q9H553 416 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 SLC9A8Q9Y2E8 581 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 GMPPBQ9Y5P6 360 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 CEP290O15078 2479 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 ELOVL7A1L3X0 281 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 RASGRP1O95267 797 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 ALDOAP04075 364 aaKnown RBP9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 GKP32189 559 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 TM4SF4P48230 202 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 MAPK10P53779 464 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 USP46P62068 366 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 HMGCS1Q01581 520 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 C9orf64Q5T6V5 341 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 PM20D1Q6GTS8 502 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 SFRP1Q8N474 314 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 HDDC3Q8N4P3 179 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 ARFGAP1Q8N6T3 406 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 SRFBP1Q8NEF9 429 aaKnown RBP9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 ST13P5Q8NFI4 369 aaPredicted RBP9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 OR4A15Q8NGL6 344 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 FCRL3Q96P31 734 aaPredicted RBP9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 IL12RB2Q99665 862 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 DDX18Q9NVP1 670 aaKnown RBP9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 MOCS1Q9NZB8 636 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 ZDHHC2Q9UIJ5 367 aa9.9□□□□□ -0.82
CSGALNACT1-203ENST00000454498 A0A1B0GUL6 1792 aa9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 RPL26P61254 145 aaKnown RBP9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 RPS14P62263 151 aaKnown RBP9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 ZNHIT3Q15649 155 aaPredicted RBP9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 PITRM1Q5JRX3 1037 aa9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 LRRC66Q68CR7 880 aa9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 ABRAXAS1Q6UWZ7 409 aa9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 CDHR3Q6ZTQ4 885 aa9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 LIX1Q8N485 282 aa9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 C2CD4AQ8NCU7 369 aaPredicted RBP9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 DDHD1Q8NEL9 900 aa9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 EEF1AKMT1Q8WVE0 214 aa9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 CENPIQ92674 756 aaPredicted RBP9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 MRGPRX2Q96LB1 330 aa9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 FEM1AQ9BSK4 669 aa9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 TRIT1Q9H3H1 467 aaKnown RBP9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 DDX28Q9NUL7 540 aaKnown RBP9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 SIRPGQ9P1W8 387 aa9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 B4GALT6Q9UBX8 382 aa9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 SLC7A8Q9UHI5 535 aa9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 PGAP2Q9UHJ9 254 aa9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 NDRG2Q9UN36 371 aaKnown RBP9.9□□□□□ -0.83
CSGALNACT1-203ENST00000454498 C2orf78A6NCI8 922 aa9.89□□□□□ -0.83
CSGALNACT1-203ENST00000454498 LRRC72A6NJI9 287 aa9.89□□□□□ -0.83
CSGALNACT1-203ENST00000454498 MGRN1O60291 552 aa9.89□□□□□ -0.83
CSGALNACT1-203ENST00000454498 SLC26A3P40879 764 aa9.89□□□□□ -0.83
CSGALNACT1-203ENST00000454498 NEK2P51955 445 aa9.89□□□□□ -0.83
CSGALNACT1-203ENST00000454498 ERVK-8P63133 956 aa9.89□□□□□ -0.83
CSGALNACT1-203ENST00000454498 PCLAFQ15004 111 aa9.89□□□□□ -0.83
CSGALNACT1-203ENST00000454498 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.89□□□□□ -0.83
CSGALNACT1-203ENST00000454498 Q6ZVL8 140 aa9.89□□□□□ -0.83
CSGALNACT1-203ENST00000454498 EIF3MQ7L2H7 374 aaKnown RBP9.89□□□□□ -0.83
CSGALNACT1-203ENST00000454498 BNIPLQ7Z465 357 aa9.89□□□□□ -0.83
CSGALNACT1-203ENST00000454498 ZMIZ2Q8NF64 920 aa9.89□□□□□ -0.83
CSGALNACT1-203ENST00000454498 XAGE5Q8WWM1 108 aa9.89□□□□□ -0.83
CSGALNACT1-203ENST00000454498 ROPN1LQ96C74 230 aa9.89□□□□□ -0.83
CSGALNACT1-203ENST00000454498 VPS35Q96QK1 796 aa9.89□□□□□ -0.83
CSGALNACT1-203ENST00000454498 EBPLQ9BY08 206 aa9.89□□□□□ -0.83
CSGALNACT1-203ENST00000454498 OR10H1Q9Y4A9 318 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms