RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 RANBP9Q96S59 729 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 INSM2Q96T92 566 aaPredicted RBP5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MESP1Q9BRJ9 268 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TUBB2BQ9BVA1 445 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 XKR8Q9H6D3 395 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 C10orf88Q9H8K7 445 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ZBTB20Q9HC78 741 aaPredicted RBP5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SLAMF7Q9NQ25 335 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 WASH6PQ9NQA3 447 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PCMTD2Q9NV79 361 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ASF1BQ9NVP2 202 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 HRASLS2Q9NWW9 162 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 GPR83Q9NYM4 423 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 NFKBIL1Q9UBC1 381 aaPredicted RBP5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SLC24A2Q9UI40 661 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TCFL5Q9UL49 500 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 NENFQ9UMX5 172 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SRPK3Q9UPE1 567 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ARL5AQ9Y689 179 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 DOCK10Q96BY6 2186 aa5.84□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PCNX1Q96RV3 2341 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 A0A0A6YYK5 440 aaPredicted RBP5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 GLYATL1P3A0A0U1RQE8 302 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ARHGAP10A1A4S6 786 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MACROD2A1Z1Q3 448 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 BTN3A1O00481 513 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TOX3O15405 576 aaPredicted RBP5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 LDB2O43679 373 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 VEGFDO43915 354 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SERPINC1P01008 464 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CAPN1P07384 714 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SLC35G4P0C7Q5 338 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 VCLP18206 1134 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MX2P20592 715 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CYP2A7P20853 494 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CDH3P22223 829 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 KDELR1P24390 212 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TNFRSF8P28908 595 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 RORAP35398 523 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SPAM1P38567 509 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PREPP48147 710 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 WNT3AP56704 352 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 HSD11B2P80365 405 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TMPRSS15P98073 1019 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SRSF11Q05519 484 aaKnown RBP5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ADCY2Q08462 1091 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 WASHC5Q12768 1159 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 NCF4Q15080 339 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 HADHQ16836 314 aaKnown RBP5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PLEKHS1Q5SXH7 462 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 KAZNQ674X7 775 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CAVIN1Q6NZI2 390 aaKnown RBP5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ALKBH5Q6P6C2 394 aaKnown RBP5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TMEM220Q6QAJ8 160 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 KDELC1Q6UW63 502 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 OOSP2Q86WS3 158 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CCDC50Q8IVM0 306 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 FAM20CQ8IXL6 584 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 D2HGDHQ8N465 521 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 DTWD1Q8N5C7 304 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ZBTB2Q8N680 514 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 METTL27Q8N6F8 245 aaPredicted RBP5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 AMER2Q8N7J2 671 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 LMNTD1Q8N9Z9 388 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 DDHD1Q8NEL9 900 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 OR4E2Q8NGC2 313 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 THAP4Q8WY91 577 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 FATE1Q969F0 183 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TADA1Q96BN2 335 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SNRNP40Q96DI7 357 aaKnown RBP5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TTC25Q96NG3 672 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 RNF157Q96PX1 679 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 FAM118BQ9BPY3 351 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 GORASP1Q9BQQ3 440 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SLC25A51Q9H1U9 297 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 FAM96AQ9H5X1 160 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ACTR5Q9H9F9 607 aaPredicted RBP5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 GLOD4Q9HC38 313 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MAGEE1Q9HCI5 957 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MLXIPLQ9NP71 852 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SPTLC3Q9NUV7 552 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 EPHA6Q9UF33 1036 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CIDEBQ9UHD4 219 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 FKBPLQ9UIM3 349 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 POMT2Q9UKY4 750 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PLAGL1Q9UM63 463 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CDYLQ9Y232 598 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 FARSAQ9Y285 508 aaKnown RBP5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PCDHGA9Q9Y5G4 932 aaKnown RBP5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 DCHS2Q6V1P9 2916 aa5.83□□□□□ -1.48
HLA-DPA3-207ENST00000454398 DNHD1Q96M86 4753 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TACC2O95359 2948 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CCDC78A2IDD5 438 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 RGSL1A5PLK6 1076 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ANKUB1A6NFN9 424 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 GPR89AB7ZAQ6 455 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MEN1O00255 615 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 BTN3A3O00478 584 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PPP1R12AO14974 1030 aaPredicted RBP5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SGTAO43765 313 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms